Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g2736 ATGGCTTCCCTTCTCTCTACCACAACTACACTTCAACATACTCACAACAAAATCTGTTTCTCTCCTTTAAAACTCACAATCCCGTTTAACAATTCTTTCTTAACAAACCATTTCAACCATCATTCTATAAGGTGTAATGCATTTTTCGATATCATCCCCAAAGAAATATTATTGAGCAGCACTTTTTATTTGGATAAGTTTCAGAGTGTGAGTGAGGATTTATCAGACATGCAAAGGTTGGAGATTTTTCTCTTTGTTGGGCTGACATGGTTGTACTTAACTGCAAGACCAGGTGTTCTTTTTGGTGCCATTGATGCGTACCTTTTGGCTCCAACGCAATTGGTTTTGGATAGTTTATCCGGACGGAGAAGCATGAAGAGGAGTGATTTCTTGATTGGTGATAAGATAGGCGAAGGGTCGTTCGGTGTTGTTTATTCCGCTGTTTTGGCAACAAAGAATGTGGATGCAAAAGAGAGGATTCAGAAGAATGGAAGAGGTAAGATGGATGCTAAATCTAAGGATAAAGTCATTCTTAAAAAGATAAAGGTTGGAACTGAAGGGGCTAAAGAATTTGGTGATTTTGAGGAGTGGTTCAATTATAGACTCTCCAGAGCAGCTCCTGAAACATGTGCCAAGTTTCTTGGAAGTTTTGTAGCAGATAAAAGCAATTCTCAGTTCACAAAAGGTGGAAAATGGCTAGTTTGGAAGTTTGAGGGAAGCCGTACTCTCGGGGATTACATGACAGATAAAACCTTCCCTTCAAACTTAGAGTCCATCATGTTCGGAAGTGTCTTGCAAGGTGTAGAATCTTCTAAAAGAAATTCACTTATCATCAAGCAAATAATGCGACAAATCGTTACATCTCTTAAGAAAATTCATGATACTGGCATTGTACACAGGGATGTAAAGCCTTCAAACTTGGTTGTTACAAAACAAGGACAGATTAAACTCATTGATTTCGGTGCAGCAACAGACCTTAGAATTGGAAAGAATTTTGTTCCTGATTATACACCTTTGGATCCTGATTATTGTCCACCGGAACTATATGTGCTACCACAAGAAACACAAAGTCTTCCTCCCGAGCCAATTGCAGCTTTACTTTCACCAATCTTGTGGCAGGTTTTATTTCTGTTATCCTATTTGTATAGGTCCTGTTTGGATAAACAGGCTAGTTAA 1176 0.3869 MASLLSTTTTLQHTHNKICFSPLKLTIPFNNSFLTNHFNHHSIRCNAFFDIIPKEILLSSTFYLDKFQSVSEDLSDMQRLEIFLFVGLTWLYLTARPGVLFGAIDAYLLAPTQLVLDSLSGRRSMKRSDFLIGDKIGEGSFGVVYSAVLATKNVDAKERIQKNGRGKMDAKSKDKVILKKIKVGTEGAKEFGDFEEWFNYRLSRAAPETCAKFLGSFVADKSNSQFTKGGKWLVWKFEGSRTLGDYMTDKTFPSNLESIMFGSVLQGVESSKRNSLIIKQIMRQIVTSLKKIHDTGIVHRDVKPSNLVVTKQGQIKLIDFGAATDLRIGKNFVPDYTPLDPDYCPPELYVLPQETQSLPPEPIAALLSPILWQVLFLLSYLYRSCLDKQAS* 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g2736 391 PANTHER SERINE/THREONINE-PROTEIN KINASE STN8, CHLOROPLASTIC-RELATED 2 374 IPR044803 GO:0004674|GO:0009579
Psa3g2736 391 ProSitePatterns Serine/Threonine protein kinases active-site signature. 297 309 IPR008271 GO:0004672|GO:0006468
Psa3g2736 391 SUPERFAMILY Protein kinase-like (PK-like) 127 349 IPR011009 -
Psa3g2736 391 Gene3D Phosphorylase Kinase; domain 1 117 237 - -
Psa3g2736 391 Pfam Protein kinase domain 276 349 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa3g2736 391 PANTHER SERINE/THREONINE-PROTEIN KINASE STN8, CHLOROPLASTIC 2 374 - -
Psa3g2736 391 SMART serkin_6 130 391 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa3g2736 391 Gene3D Transferase(Phosphotransferase) domain 1 266 376 - -
Psa3g2736 391 ProSiteProfiles Protein kinase domain profile. 130 391 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g2736 Psa-Chr3 229841672 229844584 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g2736 130 326 MAP Kinase Kinase Kinase AT3G13530 22.500 3.75e-09 57.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-4 Psa3g2736 Pkinase 6.5e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g2736 - - gmx:100795624 560.066
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g2736 3 229841672 229844584 Psa3g2736 3 229841672 229844584 ECH