Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g2728 ATGGAAAATGAAAATCTAGGTCATGGCCGTGGGAAGGTGATTGATGAGTTATTAAGAGGACGTGAACTTGCAAATCAACTTAGAAATATCCTCAATGAAAGTGGTGATGTTGATGATAATAATGGATCAACAACACCATTTGCTGAACATCTTTTGAAGGAAGTGCTTATGACCTTTACCAATTCTCTCTTGTTCTTGAATAATACTCAAACTTCTGAGGTCTCTGATGTGCAACTCACCAAATCTGAAGATTCTCTTGAGAGTAATTGCAAGAGTACTTCCATTGTTAAGGAACGAAGAGGTTGTTACAAAAGAAGAAAAGTTTCACAAACATGGGAGAAGGAATCTGAATATCTAGTGGAAGATGGTCATCAATGGAGAAAGTATGGCCAAAAAACTATCCTCAACACCAAATTCCCAAGGAACTACTACAGGTGCACTCATAAAATTGAACAAGGTTGCAAAGCAACAAAACAAGTGCAAAAAATTCAAGAGGATCCATCTCTTTTCAAAACAGTCTACTATGGCCATCACACATGTAGAATCTTACAAAGCCCTGAGATCATTGTGGATTCATCACTTTCTCCTTCTCATCACTCCTCCATGTTCCTTAGCTTTGACAACTCTTTCCCAACACCAGCCAAACAAGATTGTCCTTTTCTCTCATCACCTTCTTATCCATCAACATCATCATCAATAATATCATCATTGAAAAAGGAGTGCAAGGAAGAGATTGTTTATCCTCCTCATTCATCTTCAGCTAATGATTATTACCTCTCTGGACTCACTTTTGATGATTCAGAAAAGGATGTCACACTATCATCAACCCTTGATTCTCATCAACTAGGTGTCAATATTCCTGATATCTTGTATGATGATGTCCTTAATTGGCCTCTTTCTTGA 903 0.3754 MENENLGHGRGKVIDELLRGRELANQLRNILNESGDVDDNNGSTTPFAEHLLKEVLMTFTNSLLFLNNTQTSEVSDVQLTKSEDSLESNCKSTSIVKERRGCYKRRKVSQTWEKESEYLVEDGHQWRKYGQKTILNTKFPRNYYRCTHKIEQGCKATKQVQKIQEDPSLFKTVYYGHHTCRILQSPEIIVDSSLSPSHHSSMFLSFDNSFPTPAKQDCPFLSSPSYPSTSSSIISSLKKECKEEIVYPPHSSSANDYYLSGLTFDDSEKDVTLSSTLDSHQLGVNIPDILYDDVLNWPLS* 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g2728 300 SMART WRKY_cls 120 182 IPR003657 GO:0003700|GO:0006355|GO:0043565
Psa3g2728 300 ProSiteProfiles WRKY domain profile. 115 178 IPR003657 GO:0003700|GO:0006355|GO:0043565
Psa3g2728 300 Pfam WRKY DNA -binding domain 121 181 IPR003657 GO:0003700|GO:0006355|GO:0043565
Psa3g2728 300 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 11 283 IPR044810 GO:0003700
Psa3g2728 300 Gene3D WRKY domain 104 182 IPR036576 GO:0003700|GO:0006355|GO:0043565
Psa3g2728 300 SUPERFAMILY WRKY DNA-binding domain 118 181 IPR036576 GO:0003700|GO:0006355|GO:0043565
Psa3g2728 300 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 11 283 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g2728 Psa-Chr3 229177149 229179331 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g2728 12 204 WRKY Transcription Factor Family AT3G56400 39.614 3.10e-39 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Psa3g2728 WRKY 2.7e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g2728 - - mtr:MTR_7g073430 444.506