Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g2712 ATGTGGGCTCTAAGAGTTCATGGATATGTCTTGGCTTTTTCATTTTGTTTCATCACTTTCATGGCAGCATCACAAAAAACAGATCCTTCAGAAGTCAAAGCACTGATAGACATCAAAAATAGTTTGATTGATCCAATGGGAAAACTGAGGAATTGGAATAAGGGCGATCCATGTGCAGCACACTGGACTGGAATTTGGTGTTTCGATAAAACGGGCGATGATGGTTACTTCCATATCCGCGAGCTCTACCTGATGACTATGAATCTCTCGGGAACTCTAGCGCCGCAGCTTGGTATGCTTTCCCAACTCAACATAATGGATTTCATGTGGAACAATCTGACTGGCACAATACCGAAAGAAATCGGACACATTACATCGTTGAGACTCTTGCTCTTGAATGGAAATAAATTATCTGGCAGTTTACCGGATGAGCTTGGCAACCTTACGAATATGAATAGACTCCAACTAGATGAAAACCAACTGTCAGGTTCTGTGCCAGAATCGTTAGCGAATATGATCAACGTTAGACACCTCCACATGAACAACAACTCGTTCACTGGTCAACTTCCATCCAAACTTTCAAACCTTTCCAATCTTATGCATTTGCTTTTGGACAACAATAACTTATCGGGATATCTTCCACCAGAATTCTCCAAGTTACACAGTTTGGAAATACTGCAACTTGATAACAATAATTTCAGCGGGAATGGAATTCCTTCTACCTATGAAAATTTACCCAGGCTTGTAAAATTGAGTCTGAGAAATTGCAGCCTGCAAGGAGCTATTCCCGATTTAAATTCAATACCAAGTCTTAAATATTTGGATCTTAGCTGGAATCAGTTCACTGGGTCTATACCGTCAAATAATCTTTCAACCAATATGACAACTGTTGATTTGTCCCATAACAAACTCAACGGATCAATTCCCCGAGGCGGAATATATCCTTATCTTCAAAGATTGCAACTAGAGAACAATTTACTGTCTGGCTCCTTCCCCGCTACCGTATGGCAGAACATGTCCTTCAGCAGAAAGGCGAAACTTATAATTGATTTTCATAACAACTTACTTTCTGACGTTTTCGGAGATCTGAATCCCCCAGCAAATGTTATCTTAAGGCTTTCTGGAAATCCCGTTTGCACGAATTCCAACATACAAGGAATTGATCAATATTGCGGTAAAGAAGGGCGTGAAGTAGATGAAGAATTTACAACGTCAATGGCTGTCTGTCCCGTTCAATCTTGTCCAGTAGATAATTTCTTTGAATACACACCCTCATTCCCCCCAGATCCTTGTTTTTGTGCAGCGCCTCTAAGAATTGGATATAGGCTTAAAAGTCCCAGTTTTTCTTACTTTCCTCCCTATAAAACTAGTTTTATAACATACATGACTAAGTCCTTAAACTTAAACTTCAATCAGTTATCGATAGATTCTTACGAATGGGAAGAGGGTCCTCGTCTCAGAATGTATCTGAAAATTTTCCCTTCATACAATGATTCTCACTCTCACACATTCAACACAAGTGAAGTCCTTCGCATTGCTAGCATCTTTTCATCATGGAGATTTCCTCACACGGTTTTTTTCGGACCGTATGAACTCCTAAATGTCACTCTTCTAGGACCTTATGCAAATATAATTATTAATACAGAGAGCAGAAAGAGAAAAACAGGCAATTATTGTTGCTATTATAATAGGAGCCGAGAAAATTCATTACAAGGACAAAAAGAGTTCTTGACTGAGATTGAGCTTTTATCGAGGTTACATCATCGAAATCTTGTCTCTCTATTAGGCTACTGTAGCGAAGAAGGAGAGCAGATGCTGATTTATGAATTCATGCCCAACGGCACACTAAGGGAATGGATTTCTGGTAAAAATAAAAAATTCAACAAAGGTCTTAGCTTTTGCATGAGATTACGGATTGCAATGGGTGCGGCGAGAGGAATACTATATCTGCATACAGAGGCTAACCCTCCTATATACCATAGAGATATTAAAGCCAGTAACATACTTCTAGACTCCAAGTTTACAGCTAAAGTGGCTGATTTTGGATTATCACGGCTTATACCATACTCAGATGAAGAGGGAACTGTACCTAAATATGTGTCAACCGTTGTGAAGGGAACACCGGGTTACTTGGATCCAGAATATATGATGACTCATAAGTTAACCGATAAAAGCGATGTATACAGCCTGGGAATTGTGTTATTAGAGCTTTTGACTGGGATGCATCCAATATCACGAGGGAAAAACATTGTCCGCGAGGTTAATCTGGCTTGTCAAAATGGCACGATGGATTCGATTATAGATACCAGAATGGGTGAGTATTCTTCTGAATGCTTAGACAAGTTCTTAGCTCTGGCCCTCAGTTGCTGTCATGATCATCCAGATGAGAGACCATCAATGATAGACGTTGTGAGAGAATTGGAAGACATTATTGCCTTGTTACCTGAAACTGAGAGTGAAATTTGTTTATCAGATGTTTCCTTAGATAATTCTGGTAAAATGGTGCCCTCGTCTTCATCATCAGCGACGACATCGGGGAACATTATGACGAGAAAGGACCAGCAGCACATGTCCGCAGATGTGTCAGGAAGCGATCTTATCAGCGGCATCGCTCCTACTATTGTTCCTCGCTGA 2634 0.4021 MWALRVHGYVLAFSFCFITFMAASQKTDPSEVKALIDIKNSLIDPMGKLRNWNKGDPCAAHWTGIWCFDKTGDDGYFHIRELYLMTMNLSGTLAPQLGMLSQLNIMDFMWNNLTGTIPKEIGHITSLRLLLLNGNKLSGSLPDELGNLTNMNRLQLDENQLSGSVPESLANMINVRHLHMNNNSFTGQLPSKLSNLSNLMHLLLDNNNLSGYLPPEFSKLHSLEILQLDNNNFSGNGIPSTYENLPRLVKLSLRNCSLQGAIPDLNSIPSLKYLDLSWNQFTGSIPSNNLSTNMTTVDLSHNKLNGSIPRGGIYPYLQRLQLENNLLSGSFPATVWQNMSFSRKAKLIIDFHNNLLSDVFGDLNPPANVILRLSGNPVCTNSNIQGIDQYCGKEGREVDEEFTTSMAVCPVQSCPVDNFFEYTPSFPPDPCFCAAPLRIGYRLKSPSFSYFPPYKTSFITYMTKSLNLNFNQLSIDSYEWEEGPRLRMYLKIFPSYNDSHSHTFNTSEVLRIASIFSSWRFPHTVFFGPYELLNVTLLGPYANIIINTESRKRKTGNYCCYYNRSRENSLQGQKEFLTEIELLSRLHHRNLVSLLGYCSEEGEQMLIYEFMPNGTLREWISGKNKKFNKGLSFCMRLRIAMGAARGILYLHTEANPPIYHRDIKASNILLDSKFTAKVADFGLSRLIPYSDEEGTVPKYVSTVVKGTPGYLDPEYMMTHKLTDKSDVYSLGIVLLELLTGMHPISRGKNIVREVNLACQNGTMDSIIDTRMGEYSSECLDKFLALALSCCHDHPDERPSMIDVVRELEDIIALLPETESEICLSDVSLDNSGKMVPSSSSSATTSGNIMTRKDQQHMSADVSGSDLISGIAPTIVPR* 878
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g2712 877 ProSiteProfiles Protein kinase domain profile. 530 811 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa3g2712 877 Gene3D Ribonuclease Inhibitor 237 418 IPR032675 -
Psa3g2712 877 Pfam Protein kinase domain 566 804 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa3g2712 877 Gene3D Ribonuclease Inhibitor 30 149 IPR032675 -
Psa3g2712 877 SUPERFAMILY Protein kinase-like (PK-like) 567 829 IPR011009 -
Psa3g2712 877 Pfam Leucine rich repeat N-terminal domain 29 67 IPR013210 -
Psa3g2712 877 SUPERFAMILY L domain-like 238 382 - -
Psa3g2712 877 ProSitePatterns Serine/Threonine protein kinases active-site signature. 658 670 IPR008271 GO:0004672|GO:0006468
Psa3g2712 877 SUPERFAMILY L domain-like 27 287 - -
Psa3g2712 877 SMART serkin_6 530 811 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa3g2712 877 Gene3D Transferase(Phosphotransferase) domain 1 612 822 - -
Psa3g2712 877 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 11 552 - -
Psa3g2712 877 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 563 844 - -
Psa3g2712 877 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 11 552 - -
Psa3g2712 877 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 563 844 - -
Psa3g2712 877 Gene3D Ribonuclease Inhibitor 153 236 IPR032675 -
Psa3g2712 877 Gene3D Phosphorylase Kinase; domain 1 559 611 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g2712 Psa-Chr3 227916469 227922587 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g2712 555 824 Receptor kinase-like Gene Family AT5G01950 65.926 7.57e-114 369
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Psa3g2712 Pkinase 1.8e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g2712 - - gmx:100815005 807.364
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g2712 3 227916469 227922587 Psa3g2712 3 227916469 227922587 ECH