Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g2698 ATGGCTGCTTGTGCTTTGTTCAATGGTGTCGGAGGAGGAAACACTACTCCTGATGAAACCAACAACAATAGTACCTCTAACTCAAGCAACATCAGCACTGAAGATTTTCACAACATGCCACAACAACAACCTCATCATTCTGAAAGAAAATTACTCAGAAAAAGAATGGCTTCTGAAATGGAACTTCAACTTCACAACAACAACAACAACGATTATCATAGGTTTTCTCGTCGAACCAACAACACTTCCTCGTTGAATTGCTCTTTACCTGCAACCACACAAAAAGGTGTCACTACTACAACAACAACAACATTAGCCTCATCAGGTAATAATAATAACAATAATAATAATAATAATAACTATCATTATCATAACAATAATAATAATAGTATTATTAACAATAATAATAATAACGTTGCTTTGTCACGAGATAACGTTGCTATTCAAAATTTCCCTACTGTGACCGTCACAACCAACTACTCCACTATGTTGCTACCTTCTTCTTGTTCTTCCAACCTCAACAATTCCTCTACCTCTGCTACAAACTACACTCATTACCAACAACCACTTGTAGAAGAACAAACCACTCTTCCTGAAATCTGTGGATTCTCTGGTTTACCTCTTTTTCCATCTCAAAATAACCGAACAAACCGAACCAACAACAACAGCAGCAACAACAGAAACAACACTAACACTGTTGTTGATGTTGTTAGTTCTTCTCCTTCAATGGAAGAAACCTCGGCTACAACAAACTGGATTGACGGTATTTTGAAGGATCTTATTCATACTTCAAACAGTGTTTCCATTCCTCAACTCATCAACAATGTTAGAGAGATAATATATCCTTGCAATCCAAACCTTGCCCTTGTTCTTGAACACAGGCTCCGTCTTCTCACAGAACCAAACACTTGTGTTCCAGAGAGAAAAAGAAACAGCACTGAACAAAGTGGTGTTAATGTTAATGGTAATGTTTTAGCTGCTTCAAATGTTAATAACTCTTCAGTGAAACTCATGAACCGTGTTGATGATGTTGTTCCAACAATTTCGTTGGTTACTTTACCTTCACAACCGCTATCCACACAACAAGATCAACAACATCAACTTCAACAACATCCAGAAGATCTTGCTCCTGCAACAACAACTACTACTACTTCTGCTGAGTTGGCACTAGCAAGGAAGAAGAAAGAGGAGATTAAAGAACAGAAGAAGAAGGATGAAGAAGGTTTGCACCTTCTAACACTTCTTCTCCAATGCGCAGAAGCTGTCTCAGCAGAGAATCTAGAACAAGCAAACAAGATGTTACTCGAGATTTCGCAGCTCTCGACTCCGTTCGGGACTTCGGCACAAAGAGTAGCAGCTTATTTCTCGGAAGCCATTTCAGCTAGACTAGTGAGTTCATGTTTAGGAATCTATGCAACACTTCCAGTTTCATCACACACACCACACAATCAAAAAGTTGCTTCAGCTTTTCAAGTCTTCAATGGAATTAGTCCATTTGTGAAATTCTCTCACTTCACTGCTAACCAAGCTATACAAGAAGCATTTGAAAGAGAAGAACGAGTTCACATCATAGATCTTGACATAATGCAAGGCTTACAATGGCCTGGTCTTTTTCATATCCTTGCTTCAAGACCAGGTGGACCACCTTATGTGAGACTCACTGGATTAGGTACTTCCATGGAAACACTTGAAGCTACTGGTAAACGTTTGTCTGACTTTGCTAATAAACTTGGTCTTCCTTTTGAGTTCTTTCCTGTTGCTGAGAAAGTTGGAAACATTGATGTTGAGAAGCTGAATGTGAGTAAATCAGAAGCTGTTGCTGTTCATTGGTTACAACATTCTTTATATGATGTAACTGGATCAGATACAAACACTTTGTGGCTCTTGCAAAGGTTGGCACCTAAAGTGGTAACAGTAGTGGAACAAGACCTGAGCAATGCAGGTTCATTCTTAGGAAGGTTTGTGGAAGCAATACATTACTACTCAGCACTATTTGATTCTCTTGGTTCAAGCTATGGTGAAGAGAGTGAAGAGAGACATGTGGTGGAGCAGCAGCTATTATCAAGAGAGATTCGTAATGTACTTGCGGTCGGAGGGCCATCGAGAAGTGGCGAGATAAAGTTTCATAATTGGAGAGAAAAACTTCAACAGTGTGGTTTTAGAGGTGTCTCTTTGGCTGGTAATGCTGCTACTCAAGCTAGTCTTCTTCTTGGTATGTTCCCTTCTGAAGGGTATACTTTGGTTGAAGATAATGGTATTCTTAAACTTGGTTGGAAAGATCTTTGTTTACTTACTGCTTCTGCTTGGAGACCTCCTTATCATACCAACACTATCATTCCTCATCATAACTAA 2352 0.3916 MAACALFNGVGGGNTTPDETNNNSTSNSSNISTEDFHNMPQQQPHHSERKLLRKRMASEMELQLHNNNNNDYHRFSRRTNNTSSLNCSLPATTQKGVTTTTTTTLASSGNNNNNNNNNNNYHYHNNNNNSIINNNNNNVALSRDNVAIQNFPTVTVTTNYSTMLLPSSCSSNLNNSSTSATNYTHYQQPLVEEQTTLPEICGFSGLPLFPSQNNRTNRTNNNSSNNRNNTNTVVDVVSSSPSMEETSATTNWIDGILKDLIHTSNSVSIPQLINNVREIIYPCNPNLALVLEHRLRLLTEPNTCVPERKRNSTEQSGVNVNGNVLAASNVNNSSVKLMNRVDDVVPTISLVTLPSQPLSTQQDQQHQLQQHPEDLAPATTTTTTSAELALARKKKEEIKEQKKKDEEGLHLLTLLLQCAEAVSAENLEQANKMLLEISQLSTPFGTSAQRVAAYFSEAISARLVSSCLGIYATLPVSSHTPHNQKVASAFQVFNGISPFVKFSHFTANQAIQEAFEREERVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMETLEATGKRLSDFANKLGLPFEFFPVAEKVGNIDVEKLNVSKSEAVAVHWLQHSLYDVTGSDTNTLWLLQRLAPKVVTVVEQDLSNAGSFLGRFVEAIHYYSALFDSLGSSYGEESEERHVVEQQLLSREIRNVLAVGGPSRSGEIKFHNWREKLQQCGFRGVSLAGNAATQASLLLGMFPSEGYTLVEDNGILKLGWKDLCLLTASAWRPPYHTNTIIPHHN* 784
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g2698 783 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 173 772 IPR005202 -
Psa3g2698 783 PANTHER PROTEIN SCARECROW 173 772 - -
Psa3g2698 783 Pfam GRAS domain family 412 770 IPR005202 -
Psa3g2698 783 ProSiteProfiles GRAS family profile. 402 770 IPR005202 -
Psa3g2698 783 MobiDBLite consensus disorder prediction 83 115 - -
Psa3g2698 783 Coils Coil 388 408 - -
Psa3g2698 783 MobiDBLite consensus disorder prediction 6 30 - -
Psa3g2698 783 MobiDBLite consensus disorder prediction 357 386 - -
Psa3g2698 783 MobiDBLite consensus disorder prediction 13 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g2698 Psa-Chr3 226244407 226247289 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g2698 200 771 GRAS Transcription Factor Family AT3G54220 66.955 0.0 740
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Psa3g2698 GRAS 2.8e-125 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g2698 - - gmx:100803919 902.123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g2698 3 226244407 226247289 Psa3g2698 3 226244407 226247289 ECH