Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g2677 ATGGAAGGGAGAGAAGGTAGCAGCACTGGAGTTACGGTGATAGGAGCGGAAGCTCCGTCGGCATATCATATGGCGCCGAGGAGTGAAGTTCCTCCGAGCCAGCATGGTCCTGTTTCTGAATCAGGAGGTGGAGCTATTGGTGTCTCGCCGGTGAGTTTGGTAATGGATGGAGGGGCAATCAAGAAAAAAAGAGGTAGACCGAGGAAATATGGGTCAGACGGGTCGGTTTCTGCTGTGGCGTTATCGCCTTTGCCGATCTCGTCTTCAGGTCCTTTTTCTAGTGAGTTTTCGTCGGGGAAGCAAGGGAAACCGAAGGGGATGGAGTTCAAGCAGTCGAAGAAAGTTGGAGGCGATCCGTTTGGTGACTCGGTTGGAACCAACTTTATGCCGCATATCATTACCGTCAACGCTGGCGAAGACATTACAATGAAGGTTATATCTTTTTCCCAACAAGGACCGCGAGCTATATGCATCTTATCCGCAAGCGGTGTGATTTCAAACGTTACGCTTCGCCAGCCCGATTCTTCTGGCGGAACTTTGACCTATGAGGGCCGATTTGAGATACTTTCGCTGTCTGGATCGTTCATGCCTACCGAGAGTCAAGGAACGAGAAGCCGGTCGGGTGGAATGAGTGTTTCTTTGTCAAGCCCCGACGGTCGTGTTGTAGGCGGTGGAGTTGCGGGTCTTCTAGTAGCTGCCAGTCCTGTGCAGGTGGTGGTTGGAAGTTTTCTGCCAAGTAACCAGCAAGACCAGAAACCAAAGAAACCGAAATCTGATTACGCAGCAGCCACCTTAACCGCACCTATTGCAGTGTCTTCCGCGCCGCCACCAACCAATGGCGAAAGGGAAGATGTCATGTGTGGTGGACACTTAGTACAAAATTCCGGAACACTTAACTCAAACCTTACTTCTCCCTCGGCCTTTCGTCGAGAAAATTGGGTTAACATGCACTCCATGCCGGACTCACTGAAGTCTGCAACCGATATTAACATATCTTTGCCCGATAACTAA 1011 0.5054 MEGREGSSTGVTVIGAEAPSAYHMAPRSEVPPSQHGPVSESGGGAIGVSPVSLVMDGGAIKKKRGRPRKYGSDGSVSAVALSPLPISSSGPFSSEFSSGKQGKPKGMEFKQSKKVGGDPFGDSVGTNFMPHIITVNAGEDITMKVISFSQQGPRAICILSASGVISNVTLRQPDSSGGTLTYEGRFEILSLSGSFMPTESQGTRSRSGGMSVSLSSPDGRVVGGGVAGLLVAASPVQVVVGSFLPSNQQDQKPKKPKSDYAAATLTAPIAVSSAPPPTNGEREDVMCGGHLVQNSGTLNSNLTSPSAFRRENWVNMHSMPDSLKSATDINISLPDN* 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g2677 336 MobiDBLite consensus disorder prediction 90 112 - -
Psa3g2677 336 Pfam Plants and Prokaryotes Conserved (PCC) domain 130 243 IPR005175 -
Psa3g2677 336 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 1 335 IPR039605 GO:0003680
Psa3g2677 336 SUPERFAMILY AF0104/ALDC/Ptd012-like 128 247 - -
Psa3g2677 336 CDD DUF296 130 220 IPR005175 -
Psa3g2677 336 Gene3D - 130 261 - -
Psa3g2677 336 PANTHER AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN 1 335 - -
Psa3g2677 336 ProSiteProfiles PPC domain profile profile. 125 266 IPR005175 -
Psa3g2677 336 MobiDBLite consensus disorder prediction 1 49 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g2677 Psa-Chr3 224862953 224866110 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g2677 6 333 AT-hook Motif Nuclear Localized (AHL) Family AT4G12080 50.000 1.19e-93 281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g2677 - - gmx:100777213 489.189
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g2677 3 224862953 224866110 Psa4g3463 4 293644722 293649894 PCT