Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g2668 ATGACGCCGTCTCAAGAAAAACGTCACCGTTCCATCTTCGAACTTCCATCAAACTACTTCGACTCTTGTCGTCTTCTCCCTTCTCCTCACTCCTCAATTTCCGACCTCAACGCAAACCATGAAACCCTTCAATCACCCTCAACCGACGCCGTCGTTTTAGGAACTAGGTTAACCTGCAATACCTGTAAGGCTCAGTTCGATTCTCTTCAAGACCAACGTTCCCACTTCAAATCCGATATTCATCGATTCAATGTGAAACTGACTATTGCTGGGAAACATATTGTGAAAGAAGAAGATTTTGAGGTTCTGACATCTGATTTTGTTAAAGACTATGATGTGTCAAGTATATCTGGATCAGAAAGTGATACGGACGACGATGATAGTGAAAATGAGTGTCGAGCTCGAAGTGATGTGCGTGGTAAGTACAGTGAAAGCTTTAAACAGAAGCTATTCGTCTGTCTTCAGACAGGGCAGAGAGTTTCTGTTTGGAAGTGTTTGATTATGAATGTGAGTGAAAATGTGTTGTATGGGGATGAACAAGTGCAGAAAAATTTGGCTGAGAGGTTGAAATCTCTGACTGTTGAGCCCAGGGATAATAGCCGTTTGAGGATCGTTCTGCTTGCATCTGGTGGGCACTTTGCGGGCTGTGTCTTTGATGGTGAAACGGTTGTGGCTCACAAGACATTTCATAGATATGTTGTGAGGGCCAAGGCTGGGAAAAAACAATCTACAAATGATGCTTCTGGCAGGGCTGCACATTCTGCTGGTGCTTCACTTCGTCGTTATAATGAACTTGCATTAAAAAAGGAAGTTCACGAACTACTTACTGCTTGGAGACCTTATTTTGATGCTTCTATTTGCATTTTTATACATGCGCCCTCAAGTAGTCGTCAACTGCTTTATGATGGAGAAAAGCCATGTTTTACCAATCCACAATGTGCCAGAAATATTGCTATGATTGTCCGCAGGCCCACTCTCAGGGAAGCAAAACGTGTATATGGCCAGTTGACCCTAGTATCCTATGAAGCAGATGAGAAGGAAGTTTTACAAAGCAATCAACAGGACGCGGAGCCACCAATTCGTATTGCTAAAAGAAATGGTGCCCTACCTGCCAGCAAAGTGGACATGGCTGGATTGGATAAAAACAACAAAGCTGAAGCTTGTTCCAGTAACCAAAATGATGAACCTCTTATTTCGAGTAACGACGAAAGTGAGAATGAGTTATCTGGTAAGTCAACTCCTTTACATCAAGCAGCACAATCTGCTGACTCTCAAAAGGTTACGGAACTCCTGGAACAAGGCTTGGATCCATGCATCAAAGATGGAAGGGGACGGACCCCGTATATGTTGGCACCTGACAAGGAAGTCAGGAACACTTTCAGAAGGTTTATGGCTTCAAATCCTGACAAATGGGATTGGAATGCTGCAAAAGTGCCTAGTGCATTGACCAAAGAAATGGAAGAATCACAAGCTGCTAAGCAGGCAGAAAAAGATGCCAAGAGAAAAGCTAGAGCAAAAGAATTGAAGAAATTACGCAAGGCAAAAGAAAAGAAGGCCCAGGCTGAAGCTGCTGAAAAACAAAAGATTGCTCCAACATCAGCTACAGGACAATCACAACCAAGAAGTGGTGTGAAATTATCAAAAGAGGAGGAACTAAAAAGAGCACAGGATGAAGAAAGAGAAAAGAGAGCAGCTGCTGCTGAGAGAAGAATGGCTGCCCTCAAAATCCAAGCTAATAATAGCATATCAGAGGCTAATAAAAGTGGATTAACCAGTGACATAGTTTGTTCCTGTTGTAATTCATCACTTGCTGGTAAAGTTCCCTTCCACCGGTATAATTACAAATACTGCAGCACTTCATGCATGCATGTACACAAAGAGATCCTAGAAGATGGTTGA 1899 0.4276 MTPSQEKRHRSIFELPSNYFDSCRLLPSPHSSISDLNANHETLQSPSTDAVVLGTRLTCNTCKAQFDSLQDQRSHFKSDIHRFNVKLTIAGKHIVKEEDFEVLTSDFVKDYDVSSISGSESDTDDDDSENECRARSDVRGKYSESFKQKLFVCLQTGQRVSVWKCLIMNVSENVLYGDEQVQKNLAERLKSLTVEPRDNSRLRIVLLASGGHFAGCVFDGETVVAHKTFHRYVVRAKAGKKQSTNDASGRAAHSAGASLRRYNELALKKEVHELLTAWRPYFDASICIFIHAPSSSRQLLYDGEKPCFTNPQCARNIAMIVRRPTLREAKRVYGQLTLVSYEADEKEVLQSNQQDAEPPIRIAKRNGALPASKVDMAGLDKNNKAEACSSNQNDEPLISSNDESENELSGKSTPLHQAAQSADSQKVTELLEQGLDPCIKDGRGRTPYMLAPDKEVRNTFRRFMASNPDKWDWNAAKVPSALTKEMEESQAAKQAEKDAKRKARAKELKKLRKAKEKKAQAEAAEKQKIAPTSATGQSQPRSGVKLSKEEELKRAQDEEREKRAAAAERRMAALKIQANNSISEANKSGLTSDIVCSCCNSSLAGKVPFHRYNYKYCSTSCMHVHKEILEDG* 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g2668 632 MobiDBLite consensus disorder prediction 484 565 - -
Psa3g2668 632 ProSitePatterns Zinc finger C2H2 type domain signature. 59 81 IPR013087 -
Psa3g2668 632 Pfam Vms1-associating treble clef domain 596 627 IPR041540 -
Psa3g2668 632 Pfam Bacteroidetes VLRF1 release factor 204 341 IPR041175 -
Psa3g2668 632 PANTHER ANKYRIN REPEAT AND ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 1 628 - -
Psa3g2668 632 MobiDBLite consensus disorder prediction 489 503 - -
Psa3g2668 632 ProSiteProfiles Ankyrin repeat region circular profile. 410 441 - -
Psa3g2668 632 ProSiteProfiles Ankyrin repeat profile. 410 442 IPR002110 GO:0005515
Psa3g2668 632 Coils Coil 545 584 - -
Psa3g2668 632 MobiDBLite consensus disorder prediction 544 565 - -
Psa3g2668 632 SUPERFAMILY Ankyrin repeat 412 465 IPR036770 -
Psa3g2668 632 MobiDBLite consensus disorder prediction 386 426 - -
Psa3g2668 632 Gene3D - 373 521 IPR036770 -
Psa3g2668 632 Coils Coil 486 525 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g2668 Psa-Chr3 223139281 223146574 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g2668 7 583 C2H2 Transcription Factor Family AT1G01930 53.030 0.0 541