Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g2662 ATGGACAACCAAACAGTTTTGCTAGTGATTACTTTTATGTGTGCAAGCATTCTCATCTTCATTCTTAGAAGTCAAAATTCTAGAAAACTTCCACCAGGGCCACACCCACTTCCCATAATTGGTAATATCTTAGAACTTGGCAAAAACCCACACAAGTCTCTCACAAATCTATCTAAAATCTATGGACCGATCATGACACTAAAATTAGGAACAATAACAACCATAGTAATCTCATCCCCTCAAGTAGCCAAACAAGTCTTACATGAAAATTCACAAATCTTCTCTAATAGAATTATTCCACATGCACTTTTTGCAGTTGATCATGGCAAATTCTCAATTGCGTGGCTTCCGACATTAGATTTGTGGAAGAAACTAAGAAAAGTTTGTGCTACACAAGTGTTTTCTAAAAAAATGCTTGACTCAACAAAAATCCTTCGCCAACCAAAGTTGCAAGAGCTATTAGATTATGTGAAAGAGAAAAGCAAGAAAGGTGAGGCTTTTGATATTAATGAGGCTGTTTTTACAACTGTCTTAAACTCAATTTCAAACACTTTGTTCTCTATGGATTTGGTTCATTCCACACATGATGAAAAGTCTCAAGAGTTTAAGAACATTATTTATGGTATCATGGAAGAAGCTGGTAAGCCTAATGTTTCAGATTTCTTTCCTATTCTCCGTCCTTTAGATCCACAAGGTTTGTATACAAGGATGAAAAATCATATGAAGAAGTTGTGTGAGATTTTTGATAAGATTATTGAAGAAAGAATTTCTTCAAGATCTTCCAAAGTCGATGGTTCCGAGGATTTTTGCAATGATGTGTTAGATTCACTTCTCAAAATCAACAATATTGGAGAAACCATGTTAGCATTAAGCCGCGATGAGATGGTGCATCTATTTCTGGATTTATTTGTTGCTGGGATCGACACAACATCAAGCACAATTGAATGGATAATGGCAGAATTATTTCGTAATCCGGAAAAGTTAATAAAAGCAAGAAAAGAGTTAAGTCAAACAATAGATAAAGATGAAATAATTGAGGAATCACATATTTCAAAGTTAACTTTCTTACAAGCAATAGTGAAGGAAACATTTCGTTTGCACCCACCAATTCCATTTTTACTACCCCACAAATGTGAAGAAACTGTCAACATATTAGGCTTCAATGTGCCAGAAAATGCACAAGTATTAGTCAATGTATGGGCCATGGGAAGAGATTCAACTATTTGGGAAAATCCAAATGTGTTCATACCTGAAAGATTTTTGGAGCATGATGTTAATTACAAGGGTAATAATTTTGAGCTTATTCCATTTGGAGCAGGGAAAAGAATTTGTCCAGGATTGCCATTAGCTCATAGGACTGTGCATTTAGTGGTGGCAACCCTCATACATAATTTTGAATTGAATCTTGCTGATATGGTAATGCCAGAAGAAATGAATATGGATGAGAAATTTGGGTTAACATTAAAAAGGGTTCAATCTCTTCGAATTCAAGCTATTGCATAG 1503 0.35 MDNQTVLLVITFMCASILIFILRSQNSRKLPPGPHPLPIIGNILELGKNPHKSLTNLSKIYGPIMTLKLGTITTIVISSPQVAKQVLHENSQIFSNRIIPHALFAVDHGKFSIAWLPTLDLWKKLRKVCATQVFSKKMLDSTKILRQPKLQELLDYVKEKSKKGEAFDINEAVFTTVLNSISNTLFSMDLVHSTHDEKSQEFKNIIYGIMEEAGKPNVSDFFPILRPLDPQGLYTRMKNHMKKLCEIFDKIIEERISSRSSKVDGSEDFCNDVLDSLLKINNIGETMLALSRDEMVHLFLDLFVAGIDTTSSTIEWIMAELFRNPEKLIKARKELSQTIDKDEIIEESHISKLTFLQAIVKETFRLHPPIPFLLPHKCEETVNILGFNVPENAQVLVNVWAMGRDSTIWENPNVFIPERFLEHDVNYKGNNFELIPFGAGKRICPGLPLAHRTVHLVVATLIHNFELNLADMVMPEEMNMDEKFGLTLKRVQSLRIQAIA* 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g2662 500 Gene3D Cytochrome P450 22 499 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa3g2662 500 PRINTS P450 superfamily signature 305 322 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa3g2662 500 PRINTS P450 superfamily signature 358 369 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa3g2662 500 PRINTS P450 superfamily signature 435 444 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa3g2662 500 PRINTS P450 superfamily signature 444 455 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa3g2662 500 PRINTS E-class P450 group I signature 58 77 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa3g2662 500 PRINTS E-class P450 group I signature 82 103 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa3g2662 500 PRINTS E-class P450 group I signature 294 311 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa3g2662 500 PRINTS E-class P450 group I signature 314 340 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa3g2662 500 PRINTS E-class P450 group I signature 357 375 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa3g2662 500 PRINTS E-class P450 group I signature 398 422 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa3g2662 500 PRINTS E-class P450 group I signature 434 444 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa3g2662 500 PRINTS E-class P450 group I signature 444 467 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa3g2662 500 PANTHER CYTOCHROME P450 FAMILY PROTEIN 1 499 - -
Psa3g2662 500 SUPERFAMILY Cytochrome P450 31 497 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa3g2662 500 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 1 499 - -
Psa3g2662 500 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 437 446 IPR017972 GO:0005506|GO:0016705
Psa3g2662 500 Pfam Cytochrome P450 31 489 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g2662 Psa-Chr3 222257460 222259191 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g2662 1 494 Cytochrome P450 AT2G45550 46.108 1.87e-160 463
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g2662 - - gmx:100810526 655.21