Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g2625 ATGTCCAGCATAGGCATCATGATGTTTAGGAGAGTCTTTTTATTCATGGCTCTTATGGCGACGAATTCAATCGCGTTCGCGGTGCAACAAACATATATAGTCCACATGGACAAGACCAAAATTGAAGGCTCGGTTCATTCTCAAGACAGTACAAAAGCATGGTCTGAATCAATCATTGATTTCATTGCTGAAGCTTCCATGGAGGGAGAAGAGCTAGAAGATGTTTTATCACCTCAGCTTCTATATGCCTATGAAACTAACATGTTTGGTTTTGCAGCCACGCTTTCTGAGAATCAAGTTGAACACTTGAACCAAATTGATGGTTTTCTTTCAGCCATACCTGATGAACTATCAACCCTCGATACGACACAGACGCCAAACTTTCTTGGCCTAACTAATGGTAAAGGACTTTGGAGTGCTCCGAGTTTGGCCTCCGATGTGATCATCGGTGTCCTTGATTCGGGAATATGGCCCGAACATGTCAGTTTCGAAGACTCGGGCTTTTCCTCGATCCCTCGTAAATGGAAAGGTGTTTGTCAACAAGGCACGAAATTCACATCCTCAAATTGTAACAAGAAGCTTATTGGTGCAAGATACTATTTCAAAGGGTACGAAAAATTCATCGGGAAAATCAACGAAACGACCGATTATCTTTCTGCTAGAGACACTCAAGGGCATGGAACTCACACTGCCTCGACCGCAGCCGGTAATGTGGTTCAAAATGCAAACATTTTTGGACTTGCTAAAGGCTCAGCCAGTGGAATGAGGCACACGTCAAGAATCGCGGCTTATAAAGTTTGCTGGCTTTCTGGCTGCGCGAATTCCGACCTATTAGCAGCCATGGACCAAGCAGTTTCCGACGGTGTTGATGTACTTTCACTATCTTTAGGAAGTATTCCAAAACCATTTTATAATGATAGTATTGCTATAGCTTCATTCGGAGCAACGAAAAACGGCGTTTTTGTTTCTTGCTCAGCAGGCAACTCAGGCCCTTTTGCATCAACAGTCGGAAACGGCGCACCGTGGATCATGACAGTTGCTGCTAGCTACATTGACAGAACTTTTCCAACACAAGTGAAACTTGGTAACTCAAAAACATTTGAAGGCACATCATTGTACCAAACAAAAAACCAATCAAACCAACAACTCCCACTTGTGCATGGAACAACAGCAGGTAAAAAGAGAGAAGCAATGTTTTGCACAAAAGGCTCACTTGATAAAACACTTGTTTTCGGAAAAATCGTTGTTTGCGAAAGAGGAATCAACGGTAGAACTGAAAAAGGAGAGGTGGTTAAAAAATCAGGCGGATATGGAATGATACTACTCAACTCGGAAAATCAAGGCGAAGAGCTTCTTTCCGACGCTCACGTTTTACCAGGAACTTCATTAGGTGCTTCAGCAGAACAGTGCAGAATGTGA 1419 0.4299 MSSIGIMMFRRVFLFMALMATNSIAFAVQQTYIVHMDKTKIEGSVHSQDSTKAWSESIIDFIAEASMEGEELEDVLSPQLLYAYETNMFGFAATLSENQVEHLNQIDGFLSAIPDELSTLDTTQTPNFLGLTNGKGLWSAPSLASDVIIGVLDSGIWPEHVSFEDSGFSSIPRKWKGVCQQGTKFTSSNCNKKLIGARYYFKGYEKFIGKINETTDYLSARDTQGHGTHTASTAAGNVVQNANIFGLAKGSASGMRHTSRIAAYKVCWLSGCANSDLLAAMDQAVSDGVDVLSLSLGSIPKPFYNDSIAIASFGATKNGVFVSCSAGNSGPFASTVGNGAPWIMTVAASYIDRTFPTQVKLGNSKTFEGTSLYQTKNQSNQQLPLVHGTTAGKKREAMFCTKGSLDKTLVFGKIVVCERGINGRTEKGEVVKKSGGYGMILLNSENQGEELLSDAHVLPGTSLGASAEQCRM* 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g2625 472 SUPERFAMILY Subtilisin-like 120 384 IPR036852 GO:0004252|GO:0006508
Psa3g2625 472 PANTHER SUBTILISIN-LIKE PROTEASE SBT1.1 21 469 - -
Psa3g2625 472 Gene3D - 352 466 - -
Psa3g2625 472 ProSiteProfiles Serine proteases, subtilase domain profile. 126 472 - -
Psa3g2625 472 CDD PA_subtilisin_like 359 469 - -
Psa3g2625 472 CDD Peptidases_S8_3 119 349 IPR034197 -
Psa3g2625 472 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 21 469 IPR045051 -
Psa3g2625 472 Pfam Peptidase inhibitor I9 31 116 IPR010259 -
Psa3g2625 472 Gene3D Peptidase S8/S53 domain 146 351 IPR036852 GO:0004252|GO:0006508
Psa3g2625 472 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 149 160 IPR023827 -
Psa3g2625 472 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 20 121 IPR037045 -
Psa3g2625 472 Pfam Subtilase family 145 374 IPR000209 GO:0006508|GO:0008236
Psa3g2625 472 Pfam PA domain 383 464 IPR003137 -
Psa3g2625 472 PRINTS Subtilisin serine protease family (S8) signature 144 163 IPR015500 -
Psa3g2625 472 PRINTS Subtilisin serine protease family (S8) signature 222 235 IPR015500 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g2625 Psa-Chr3 219495727 219498071 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g2625 29 466 Subtilisin-like Serine Gene Family AT1G01900 55.909 8.64e-170 495
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g2625 - - lja:Lj0g3v0335989.1 729.169