Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g2613 ATGATTTATGTTCATTCAAAAGGCATGATAGTTGATGATGAATATGTGATTGTGGGATCTGCGAACATTAACCAACGCTCTATGGAAGGAACAAGGGACAGCGAGATTGCAATGGGAGCATACCAACCTCATCATACCTGGGCGAGAAAATATTCCTATCCACTTGGACAAATCCATGGATACAGGATGTCACTTTGGGCAGAACATACTGGAGCACTTGATGACTGTTTCTTGCAACCGGAGAGCCTTGAATGCGTACGAAAAGTTAGAGCAATTGGTGAAATGAACTGGAAACAATTTGCAACAAGTGAAGTATCAGAGATGAGAGGGCATCTTCTAAAATACCCTGTAGATGTTGATCGAAAGGGGAAAGTCAGATCACTTCCCGGTTATGAAGAGTTTCCTGATGTAGGAGGGAAAATTGTTGGATCGTTTCTTGCCATGAAGGAGAATCTTACCATTTGA 465 0.4194 MIYVHSKGMIVDDEYVIVGSANINQRSMEGTRDSEIAMGAYQPHHTWARKYSYPLGQIHGYRMSLWAEHTGALDDCFLQPESLECVRKVRAIGEMNWKQFATSEVSEMRGHLLKYPVDVDRKGKVRSLPGYEEFPDVGGKIVGSFLAMKENLTI* 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g2613 154 SUPERFAMILY Phospholipase D/nuclease 2 86 - -
Psa3g2613 154 SMART pld_4 1 27 IPR001736 GO:0003824
Psa3g2613 154 Pfam Phospholipase D Active site motif 1 27 IPR001736 GO:0003824
Psa3g2613 154 Pfam Phospholipase D C terminal 74 144 IPR024632 -
Psa3g2613 154 PANTHER PHOSPHOLIPASE D ALPHA 1 1 154 - -
Psa3g2613 154 Gene3D Endonuclease Chain A 1 54 - -
Psa3g2613 154 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 1 27 IPR001736 GO:0003824
Psa3g2613 154 PANTHER PHOSPHOLIPASE D 1 154 IPR015679 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g2613 Psa-Chr3 218297591 218299578 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g2613 1 154 Phospholipase D Gene Family (Wang group) AT2G42010 81.169 9.29e-88 275
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g2613 K01115 - lja:Lj0g3v0363499.1 294.664