Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g2599 ATGCAGAACGAAGAAGGCCAAATCACCGAGCTCTATATTCCTAGAAAATGTTCTGCTACAAACAGATTGATAACCGCCAAGGATCATGCTTCGGTTCAGATCAACGTCGGTCATTTGGATGAAAGCGGTGTTTACAATGGTCACTTCTCCACTTTCGCTCTCTGTGGCTACGTTCGCGCACAGGGAGATGCTGACAGTGGACTCGATCGATTGTGGCAGAAAAAGAAAACCGAAATTAAGCAGTAG 246 0.4593 MQNEEGQITELYIPRKCSATNRLITAKDHASVQINVGHLDESGVYNGHFSTFALCGYVRAQGDADSGLDRLWQKKKTEIKQ* 82
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g2599 81 Pfam Ribosomal protein S21e 1 76 IPR001931 GO:0003735|GO:0005840|GO:0006412
Psa3g2599 81 PIRSF RPS21e 1 81 IPR001931 GO:0003735|GO:0005840|GO:0006412
Psa3g2599 81 Gene3D - 1 80 IPR038579 -
Psa3g2599 81 PANTHER 40S RIBOSOMAL PROTEIN S21 1 81 - -
Psa3g2599 81 ProSitePatterns Ribosomal protein S21e signature. 11 19 IPR018279 GO:0003735|GO:0005840|GO:0006412
Psa3g2599 81 PANTHER 40S RIBOSOMAL PROTEIN S21 1 81 IPR001931 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g2599 Psa-Chr3 217734294 217736739 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g2599 1 81 Cytoplasmic Ribosomal Protein Gene Family AT5G27700 82.716 7.68e-51 152
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g2599 K02971 - qsu:112023313 162.155