Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g2594 ATGTTGGTTGTTCCACTAGAGTTAGCAATTACTCCCATGAGGGTGTTGCAAGATCCTTTTCTAGGACCAGAATGTAGAGCATTGTTTGAAGAAGGAGATGTAGATGACAGGTTCTTAATGATGCTGTTTTTGACCGTGGAGCGTTTGCGTAAGGGTTCTCTATGGAAGCCGTACCTTGATATGCTGCCAACCACTTTCGGAAATACACTTTGGTTTAGTGAAGAAGAACTTCAAGAGCTGAGAGGAACTAACTTGTATCGTGCAACTGAGTTACAGAAGAAAAGCCTGTTGAATTTATATGAAACTAAAGTGAAGGATTTAGCGAAGAAACTTTTGAATCTTGACGGAGATTCTGAGATTGAGGTGTGCTTTGAAGATTTCCTGTGGGCAAATTCAGTTTTTTGGAGCCGTGCTTTGAATATTCCAATGCCTCGTTCTTATGTATTTCCTGAGATGCAAGATGTTCATCAAAGTGGCACTCCAGAAGCTGATAAAAAGGGCAGTGAGGTTACACAATCGGATGATCTAACCAAGGAAACGACACATAGCACAGTGCACGGAGACACCGTTTGGGTTGAGGGTCTTGTCCCTGGTATTGACTTTTGCAACCATGATTTGAAGCCAATAGCAACATGGGAAGTTGATGGAATTGGCTTAACAACAGGAGTTCCAGTCTCGATGTATCTTCTTTCCGCTGCTCAAAGTCCCTTGCAGATTGATCGAGAAATTTCCATTAGTTATGGCAACAAGGGAAATGAGGAACTTCTATATCTGTATGGCTTTGTCATTGATGGTAACACAGATGACTACCTCATGGTCCATTATCCCACAGAAGCAATAAATACTATTTCTTTTTCCGAGTCTAAAAGCCAGCTTCTTGAAGTGCAGAAAGCTGAAATGAGATGTCTTTTACCGAAAACTCTACTGGATAATGGATTTTTTCCATTAGGCACCAAAAACAGCGGGGTAAATAACCAGTGCAACCAAGTTTGCAACTATAGTTGGAGTGGTCAGCGCAAGATTCCATCTTATGTAAACAAACTCGTTTTTCCTGAGAAATTTATGGCTACCTTAAGGACCATAGCCATGCAAGAGGACGAGCTTTTCAAGGTTTCCTCAATGCTAGAAGAGCTTGTTGGACCTGAAGGGGAAAGACAGTTATCAGATACAGATGTCCAATCTGCAATATGGGAAGTTTGTGGTGATTCCGGAGCTTTACAAGTCCTAGTCGATCTTCTTCATGTCAAGTTAATGGATCTTGAAGAGCATTCTGGAACCGAGGAAAGTGACGTTGAATTGCTCAAGAAAGCCCTTATCATTGATAGCCCGGAAGATAGCAAACAAACGGGAAATGACTCGGAGGGAACAAAGATGATGACTAGAAACAAATGGTCTGCTATTGTATATAGGCGAGGTCAAAAGCAGCTAACTCGATTATTCTTGAATGAAGCAGAACATGCTCTGCAGTTATCAATGAATGAAGAGATGAGCGTTCCTTGA 1500 0.4153 MLVVPLELAITPMRVLQDPFLGPECRALFEEGDVDDRFLMMLFLTVERLRKGSLWKPYLDMLPTTFGNTLWFSEEELQELRGTNLYRATELQKKSLLNLYETKVKDLAKKLLNLDGDSEIEVCFEDFLWANSVFWSRALNIPMPRSYVFPEMQDVHQSGTPEADKKGSEVTQSDDLTKETTHSTVHGDTVWVEGLVPGIDFCNHDLKPIATWEVDGIGLTTGVPVSMYLLSAAQSPLQIDREISISYGNKGNEELLYLYGFVIDGNTDDYLMVHYPTEAINTISFSESKSQLLEVQKAEMRCLLPKTLLDNGFFPLGTKNSGVNNQCNQVCNYSWSGQRKIPSYVNKLVFPEKFMATLRTIAMQEDELFKVSSMLEELVGPEGERQLSDTDVQSAIWEVCGDSGALQVLVDLLHVKLMDLEEHSGTEESDVELLKKALIIDSPEDSKQTGNDSEGTKMMTRNKWSAIVYRRGQKQLTRLFLNEAEHALQLSMNEEMSVP* 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g2594 499 Gene3D set domain protein methyltransferase, domain 1 1 262 - -
Psa3g2594 499 SUPERFAMILY SET domain 2 266 IPR046341 -
Psa3g2594 499 CDD SET_LSMT 1 262 - -
Psa3g2594 499 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 1 495 - -
Psa3g2594 499 PANTHER SET DOMAIN-CONTAINING PROTEIN 1 495 - -
Psa3g2594 499 MobiDBLite consensus disorder prediction 155 181 - -
Psa3g2594 499 MobiDBLite consensus disorder prediction 158 181 - -
Psa3g2594 499 Pfam SET domain 40 248 IPR001214 GO:0005515
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Psa3g2594 SET 3.8e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g2594 - - gmx:100777394 835.869