Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g2580 ATGCTGCTGCTGTACATGTGGAGCGATACTTGCTCATCTTCGGAGACGGTTGTACTGAACATGTCTACACTGGCTTGGTCAGCAGTAACATCTGTTCAAGGGCGTGTTTCTGTTGCTAATGAGGGTTTGAGTTCGATTGTAAGTTCGAATGATGGAGAAGATATACTGTCAAAGATTTCCTTGGCCACAGGACATTTGGACAAGTGGCCAAATGCTGGGATTCAGATACCAACAGTTTTGTTGCTGGGATTGTCACTTGGTATTGTTCAGCTGTTCTCTAAGCAGATTTTATGTGGATTGGCTCTATTAAAAGATGCTAGCATTATTCATTGTGATCTGAAGCCAGAAAACATTCTTTTATGTGCGAGCACTGTGAAGCCAGCAGAAATAAAGATTATTGACTTTGGATCAGCATGCATGGAAAATAGCACTGTATATTCCTATATTCAGAGTCGATACTATGGGTCTCCTGAGGTTCTTCTTGGATATCAATACACAACAGCTATTGATATGTGGTCCTTTAGGTGCATAGTGGCAGAATTATTTCTTGGATTACCATTATTCCCTGAAGCTTATGCCAACTTATTCACCAATCACCGTAACTATTACTGA 612 0.4069 MLLLYMWSDTCSSSETVVLNMSTLAWSAVTSVQGRVSVANEGLSSIVSSNDGEDILSKISLATGHLDKWPNAGIQIPTVLLLGLSLGIVQLFSKQILCGLALLKDASIIHCDLKPENILLCASTVKPAEIKIIDFGSACMENSTVYSYIQSRYYGSPEVLLGYQYTTAIDMWSFRCIVAELFLGLPLFPEAYANLFTNHRNYY* 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g2580 203 PANTHER BNAC04G29850D PROTEIN 82 191 - -
Psa3g2580 203 Pfam Protein kinase domain 89 190 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa3g2580 203 ProSiteProfiles Protein kinase domain profile. 1 203 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa3g2580 203 Gene3D Transferase(Phosphotransferase) domain 1 81 201 - -
Psa3g2580 203 PANTHER DUAL SPECIFICITY PROTEIN KINASE 82 191 - -
Psa3g2580 203 SMART serkin_6 18 202 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa3g2580 203 SUPERFAMILY Protein kinase-like (PK-like) 83 192 IPR011009 -
Psa3g2580 203 ProSitePatterns Serine/Threonine protein kinases active-site signature. 108 120 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g2580 Psa-Chr3 217077723 217078494 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g2580 90 189 MAP Kinase Gene Family AT4G11330 44.660 3.53e-19 82.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_DYRK-YAK Psa3g2580 Pkinase 4e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g2580 K18670 - gmx:100792777 202.601