Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g2513 ATGGCAAAGAGGTCTCAAAGATTCCCTGTGCAGTATGAGAAAGATCAGTCAGGTTGTATGTGGGGATTTATCAGTATGTTTGATTTTCGCCATGCCCGCTTTACTCGGAAGTTGATTGCAGATAAGAGGCACAACACCAAGCATGCTCTTGAGGCTATACCTACCAAGAACAAATTTGAGGCGTTGAGCAATTTGGATGAAGAATATCAAGGCAATTTTGACAGAGGAGAGAGTACGAGACTAACTACGAAAACGGATGCTGACAAGCTTAGTGTAAAGAGACTCATAGAAGAAGAGATGTTCATTGACCGGGATGAAATAAAGGATCAAAGTAATAATGTAGGATCAAAGCGAGCCGAGTTAGAGTCTCGAGATTCCCTGAAGACAGATTCCAAAAGAAAAAGAAAATCACGCAAGAGCCGAGATATGGACACCAATGATGTGAGTGTAACTTTGAAATCAGATTTCTCAGATAATCAGCACTTAAAGCAACATTCAAGAGATAATCTAGATTTGGACAAGATAATGGAAGATTTTTGTCAAATCGAACATGCTTGTTCCTTGATGCATGACGACGATGATGATGATAGCAAAGTTAATGCTCAATCGAACCAAAAGAAGACCAATTCGGAAGAACTTGCAAGAGATGCAATTCATGATTTTGTGAATCAGAAGATATTGAGTGGGAAAGATTGTGTAGAAGATAAAAAACTTCTTTGCTCACATGAACTCATGGAAACACTTCAGGTCATAAGCTCGGATAAGGAATTGTTTCTTAGACTTCTACAAGACCCAAATTCACACTTACTGAAATATATGCAGGAGTTGGAGAATGCTCGAGGGAGAAGTGAAAAAGAATTCAATTCTGTTGCTGATTCCAACTTCTCCGAACAAGACCTTCGCAGTCTAAAACAAACCAGGGAGATTGTCAACCGAAAGCATCGTAAATTTTTCTGGAAAAAGGTAAAGTCTCAATCAAAAGTAATTGCAAAGACTGAGGTTCCAAATAGAATTGTCATTCTGAAACCTGCAACAACGGGCATGCAAATTTCAGAAAGTGAAAACAATGTTGCTTCGTCGCCTGATTCGCGTGATATTGTCCCTTACAAAGGTCCTTCTTCTATGAGAGTTGGTTCGCATTTTTCTCTTACAGAGATAAAAAGGAAATTAAAACATGCTATAGGAAAGGAGAAGAATGGAAGCTGTGAACTCCCTGCTGAAGGTGAAATCAACGGCTCAAGAGGCAAGGCGAATGGTAAAGATAAAACTGGAATGAAATCTCCTAATAAAGACCGTTTCTTCATTGAAAAAATCGCAAGACCTATGTTTGATGTTGTGAAAGGAAGCAAGACTAGTACATTGAAAGACTCCAAATTTAATGCGGAACGTGAAAGTGGTTCTAAGAAGGAAAAAGTTTCTAACATTTACATCGAGGCTAGGAAACACTTATCTGAGATGCTAGAAAATGGAGATGATGACACAGGCGTTTCTAGCAGGCAGATTCCGAAAACCCTTGGGAGAATTCTATCTCTTCCTGAGTACAACTTTTCTCCTCTTGGAAGTCCTGGAGGGAATTTGGAGCATCATTGTGCGAATGGCATCACACGTGCGAAATTTTCCACTTCAGATCAAATAATCGAGGTTAATGACGATAACTTGTCTCCCAAGCAAGTTACCTCTATCGATCAAACAGATCAGGAAACAAGCATTTCAGGGAACCAGTCAAGTGGTTGTGATGAAAATGAAAGATCTAATGAAGTACCGGAAATTGAGACAAAGTCAACTTTCTCGCATGATCTTGGTCACGATGATAATGTTGAAGCCAGATATCCTGTTAGAGATGACATTGTTGCTGAAGGTAATGTCGAACTCGCAAAAGATATAAACGTTTTGGAATCTTCCTCGGATCCAAATGACTGCATTGATCGGAAGGACCAAAATAACGATGCCTCAGAAATTCCTGATGATACTAGATTTTCTGAATGTTTGAATGAGGATGTGAAAGAAGAGAACCAACCATCATCTCCACTGTCTTCCCCTTCTCACTCTTCCATCACAGAGAAAATCGAAGAGCTAGAAAGTAGTACAGATGTATCTGGTCGACCAAGTCCGGTTTCTGTGCTCGATGTACCATTCTCCGATGATGACCCTGGCCATTCCACGTGTCAGCCTGTTAAACTACGAGTGCAGCCACTACAAATTCGATTTGAGGAACAAGAGAGTTCATCAATGGATCGATTTCGTAGAAGAAAATGTTGTTTTGAAGAAAATGAATTGATATACGACTACATAAATGCTGTCTTCAACGCCTCTGGTTTGACACAAGATCAATTATTGATGAAATGTCTTTCCTCTAACAAGATACTAGATCCTTCCTTGTTTGATCAGGTAGAGTTCTTCTCGAACATGCTTTTCCACGAGCAGAAGCTCCTATTTGACAGTATCAACGAGGTTCTCATGGAGGTTTGTTGGCATTACTTTGGAGTATCACCTTGTGTATCATTTGTAAATCCTAGTATAAGACCAACACCAAATATGAAAAAGATTATTGTCAAAGTTTGGGAGGGAGTGTGTTGGCATGTCCTTCCTTTGCCGCCTCCACATACTTTGGAACAAATTGTTAGGAAAGACCTGGCAAGAAATGGAACATGGATGGAACTTCGACTCGATGCTGAAACAGTTGGTTTTGAAATGAGTGACACCATTCTTGTAGAACTGATGGAAGATGCAATATTGAGCCTTGTGAGTGAAAGTACAGAAAGTTAA 2766 0.3977 MAKRSQRFPVQYEKDQSGCMWGFISMFDFRHARFTRKLIADKRHNTKHALEAIPTKNKFEALSNLDEEYQGNFDRGESTRLTTKTDADKLSVKRLIEEEMFIDRDEIKDQSNNVGSKRAELESRDSLKTDSKRKRKSRKSRDMDTNDVSVTLKSDFSDNQHLKQHSRDNLDLDKIMEDFCQIEHACSLMHDDDDDDSKVNAQSNQKKTNSEELARDAIHDFVNQKILSGKDCVEDKKLLCSHELMETLQVISSDKELFLRLLQDPNSHLLKYMQELENARGRSEKEFNSVADSNFSEQDLRSLKQTREIVNRKHRKFFWKKVKSQSKVIAKTEVPNRIVILKPATTGMQISESENNVASSPDSRDIVPYKGPSSMRVGSHFSLTEIKRKLKHAIGKEKNGSCELPAEGEINGSRGKANGKDKTGMKSPNKDRFFIEKIARPMFDVVKGSKTSTLKDSKFNAERESGSKKEKVSNIYIEARKHLSEMLENGDDDTGVSSRQIPKTLGRILSLPEYNFSPLGSPGGNLEHHCANGITRAKFSTSDQIIEVNDDNLSPKQVTSIDQTDQETSISGNQSSGCDENERSNEVPEIETKSTFSHDLGHDDNVEARYPVRDDIVAEGNVELAKDINVLESSSDPNDCIDRKDQNNDASEIPDDTRFSECLNEDVKEENQPSSPLSSPSHSSITEKIEELESSTDVSGRPSPVSVLDVPFSDDDPGHSTCQPVKLRVQPLQIRFEEQESSSMDRFRRRKCCFEENELIYDYINAVFNASGLTQDQLLMKCLSSNKILDPSLFDQVEFFSNMLFHEQKLLFDSINEVLMEVCWHYFGVSPCVSFVNPSIRPTPNMKKIIVKVWEGVCWHVLPLPPPHTLEQIVRKDLARNGTWMELRLDAETVGFEMSDTILVELMEDAILSLVSESTES* 922
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g2513 921 MobiDBLite consensus disorder prediction 582 606 - -
Psa3g2513 921 MobiDBLite consensus disorder prediction 637 668 - -
Psa3g2513 921 MobiDBLite consensus disorder prediction 550 606 - -
Psa3g2513 921 PANTHER (, RELATED) 1 918 - -
Psa3g2513 921 MobiDBLite consensus disorder prediction 107 146 - -
Psa3g2513 921 MobiDBLite consensus disorder prediction 107 130 - -
Psa3g2513 921 Pfam Domain of unknown function (DUF4378) 762 909 IPR025486 -
Psa3g2513 921 PANTHER ADHESIN-LIKE PROTEIN, PUTATIVE (DUF3741)-RELATED 1 918 - -
Psa3g2513 921 MobiDBLite consensus disorder prediction 669 685 - -
Psa3g2513 921 MobiDBLite consensus disorder prediction 550 581 - -
Psa3g2513 921 MobiDBLite consensus disorder prediction 637 703 - -
Psa3g2513 921 Pfam Protein of unknown function (DUF3741) 223 267 IPR022212 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g2513 Psa-Chr3 213144809 213152190 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g2513 1 899 TRM (TON1 Recruiting Motif) Superfamily AT4G00440 33.008 6.47e-103 337
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g2513 - - gmx:100783243 1171.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g2513 3 213144809 213152190 Psa3g2513 3 213144809 213152190 ECH
Psa3g2513 3 213144809 213152190 Psa4g3612 4 303816726 303821947 PCT