Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g2503 ATGGGATTCCCCATGGGGTACCCTGAAGTTTCCGTCCCCAACCTCTTCCTTCACCTTCTCTCTCTCCTCGCCTTTCTAAGATCTCTAGCCATCTCCTTCCTCTCTCTCCTCCATCTCTCCGACCTCCTCGACACCGATTTCTCCTCCGCCACCTTAACGGAATCACACCTCCACCGTCCTACCCTCTCCGCAATCCTCATCCGCGAATTCCTCCCCGTCGTCAGTTTCCGTGACCTCGCCGGAGATTCGAAAGCGATTGGATGTGCGGTGTGTCTCGACGAATTTTCCGGAGAGGAGGAAATCAGGTGTATGGCGAACTGTAGACATATTTTTCACCGGTCGTGTGTGGACCGTTGGATTGATCATGATCAGAAGACGTGTCCGCTTTGTAGGACCCACTTTGTACCATATCTTAAAATGGAAGATTATAATCAACGGTTATGGGCGGCTTGTGAATCTGAAAGTGAAGATGATGATGTTTCTCTTTTTCCTCAACATGATGATTATCACTACATTGCCACTGCTTCAATTTGA 534 0.4906 MGFPMGYPEVSVPNLFLHLLSLLAFLRSLAISFLSLLHLSDLLDTDFSSATLTESHLHRPTLSAILIREFLPVVSFRDLAGDSKAIGCAVCLDEFSGEEEIRCMANCRHIFHRSCVDRWIDHDQKTCPLCRTHFVPYLKMEDYNQRLWAACESESEDDDVSLFPQHDDYHYIATASI* 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g2503 177 PANTHER RING ZINC FINGER PROTEIN-RELATED 1 171 - -
Psa3g2503 177 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 67 136 IPR013083 -
Psa3g2503 177 SMART ring_2 88 130 IPR001841 -
Psa3g2503 177 SUPERFAMILY RING/U-box 87 145 - -
Psa3g2503 177 ProSiteProfiles Zinc finger RING-type profile. 88 131 IPR001841 -
Psa3g2503 177 PANTHER ANAPHASE-PROMOTING COMPLEX SUBUNIT 11 RING-H2 FINGER PROTEIN 1 171 - -
Psa3g2503 177 Pfam Ring finger domain 88 131 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g2503 Psa-Chr3 212455027 212456023 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g2503 1 155 C3H Transcription Factor Family AT1G63840 44.025 3.10e-41 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g2503 K16281 - gmx:100813224 188.734