Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g2479 ATGGATTCTCAACTTCCATACCAGAAAGACAGGTCTCTTGCTTCAGCTGATCATAAGAATATCAAAGGAGTTCTTACTCATGGTGGACGCTATGTTCACTACAATATCTATGGAAACCTCTTTCAAGTCTCGAGCAAGTATGTCCCTCCTATCCATCCCGTTGGAAGAGGAGCTTCTGGTATAGTCTGTTCTGCTGTAAATGTGGAGACATGCGAAAAAGTTGCTATTAAGAAGGTTGGCAATGCATTTGACAACAGAATCAATGCCAAAAGGATCTTACGAGAAATTAAACTTCTCCAGCACATGGATCATGAAAATGTGATAGTCCTTAAAGACATTATACGACCACCACAGAAAGAAAATTTCAATGATGTGTACATTGTTTATGAGTTAATGGATACCGACCTGCATCAAATAATCCGCTCCAATCAACGATTGACTGATGATCATTGTTGGTATTTTCTGTATCAGTTGTTACGGGGACTGAAATACATACACTCAGCAAATATTCTGCACCGTGATCTAAAGCCTAGCAGCTTGCTACTGAATTCCGATTGTGATCTTAAGATCGGAGACTTTGGTCTAGCTAGAACTACTTGTGAAACCGATTTCATGACCGAGTATGTGGTTACTCGATGGTACCGAGCTCCAGAGTTGCTTCTTAATTGCTCCAAATATACTGCAGCCATTGATATATGGTCAGTTGGTTGCATCCTTGGTGAAATCGTGACAAGACAGCCCCTATTTCCTGGGAAAGATTACGTTCATCAGCTCAGATTGATCACAGAGCTCATAGGTTCGCCCGATGACACCAGCCTTGGATTTCTACGAAGTGATAATGCTCGTAGATATGTAAAACAGCTTCCTCAATATCCAAGACAACAATTTGCAGCTAGGTTTCGCAACATGTCTCCCGGTGCAGTTGATTTATTAGAGAGAATGCTTGTTTTTGATCCGAACAGGCGCATTACAGTTGATGAGGCTCTGAGCCACCAATACTTGGCACCTCTCCATGATATTGTTGTGGAACCTGTTTGCTCTAGACCTTTCAATTTCGATTTTGAGAAACCGTCTTTCACCGAACAAGAGATTAAGGAACTCGTCTGGAAAGAATCTGTGAAGTTCAATCCCGATCCACCTATTTATTGA 1149 0.4143 MDSQLPYQKDRSLASADHKNIKGVLTHGGRYVHYNIYGNLFQVSSKYVPPIHPVGRGASGIVCSAVNVETCEKVAIKKVGNAFDNRINAKRILREIKLLQHMDHENVIVLKDIIRPPQKENFNDVYIVYELMDTDLHQIIRSNQRLTDDHCWYFLYQLLRGLKYIHSANILHRDLKPSSLLLNSDCDLKIGDFGLARTTCETDFMTEYVVTRWYRAPELLLNCSKYTAAIDIWSVGCILGEIVTRQPLFPGKDYVHQLRLITELIGSPDDTSLGFLRSDNARRYVKQLPQYPRQQFAARFRNMSPGAVDLLERMLVFDPNRRITVDEALSHQYLAPLHDIVVEPVCSRPFNFDFEKPSFTEQEIKELVWKESVKFNPDPPIY* 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g2479 382 ProSiteProfiles Protein kinase domain profile. 48 334 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa3g2479 382 CDD STKc_TEY_MAPK 41 377 - -
Psa3g2479 382 Gene3D Phosphorylase Kinase; domain 1 31 371 - -
Psa3g2479 382 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 11-RELATED 24 380 - -
Psa3g2479 382 Pfam Protein kinase domain 52 334 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa3g2479 382 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 24 380 - -
Psa3g2479 382 Gene3D Transferase(Phosphotransferase) domain 1 132 361 - -
Psa3g2479 382 SUPERFAMILY Protein kinase-like (PK-like) 51 341 IPR011009 -
Psa3g2479 382 ProSitePatterns Protein kinases ATP-binding region signature. 54 78 IPR017441 GO:0005524
Psa3g2479 382 ProSitePatterns MAP kinase signature. 83 186 IPR003527 GO:0004707|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g2479 Psa-Chr3 211281854 211283850 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g2479 14 377 MAP Kinase Gene Family AT4G01370 81.868 0.0 641
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Psa3g2479 Pkinase 1.8e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g2479 K20600 - gmx:100779469 660.218
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g2479 3 211281854 211283850 Psa3g2479 3 211281854 211283850 ECH