Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g2477 ATGATCAAGGCAATAGAATCACACCTTCTTTTGTTGCTTTCACCGACTCAGAGGTTGATTGGTAATTCCGCCAAAAATCAGGCTGCATATAACCCAACCAACACTGTCTTTGATGCAAAGAGGTTAATTGGAAGGAAATATAGTGATTCTATTATTCAGAATGATATAAAGTTATGGCCCTTTAGGGTCATTGCTTGTGCTGACGGCTCCCGTGATCCATGA 222 0.4054 MIKAIESHLLLLLSPTQRLIGNSAKNQAAYNPTNTVFDAKRLIGRKYSDSIIQNDIKLWPFRVIACADGSRDP* 74
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g2477 73 PANTHER HEAT SHOCK PROTEIN 70KDA 15 68 IPR013126 GO:0005524|GO:0140662
Psa3g2477 73 SUPERFAMILY Actin-like ATPase domain 14 69 IPR043129 -
Psa3g2477 73 Pfam Hsp70 protein 15 68 IPR013126 GO:0005524|GO:0140662
Psa3g2477 73 PANTHER HEAT SHOCK 70 KDA PROTEIN 15 68 - -
Psa3g2477 73 Gene3D - 13 71 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g2477 Psa-Chr3 211166943 211167295 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g2477 13 65 Calmodulin-binding Proteins AT5G02500 64.151 5.29e-21 82.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g2477 K03283 - bvg:104893144 91.2781