Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g2472 ATGGCTGCAACTTCAACTACTGTAGGAGATGCCTTTCTATCTGCACCTATTCAAACCATGATAGACAAACTAATTTCAACCGACTTTCGAGATTACGCCAACAACAAGAAGCTAAATCTCTCCCTCTTGACGCAGTTGCAAACAGCACTGCTCGCTCTTGCGCCTGTGCTGGATGATGCAGAGAAGATGCAGATCTACAATCCTGGAATCAAAAAATGGCTTGATGAGTTAAAAAATGTAATCTTCGATACAGAGGACTTGCTGAACCAAATTAGTTACGATTCTTTGCGCTGCAAGGTCACGAATCAGGTGCAGAATTTCCTTTCATCTCTTTTCAATACCAATGGAGATATCAATTCCCAAATAAAGAGTGTGTGTGAGAGACTGCAGCTTTTTGCACAACAGATAGATACCATTGGCTTGCAAACTGTAAGTCAGAAGGTTCTTCCTATGACCCATAGAAGTTCCAGATCATCCTTAAATGAATCTCTTATTGTTGGTAGGGAAAACGATAAAGAGAAATTAATTAAGATGTTGCTATCTGAAAGAGATGGTGAGAGTAATAACGTAGGTGCTGTTGCAATTGTAGGCATGGGAGGTCTCGGTAAAACGACCCTTGCTAAACTTGTTTACGACGACGTAGAAGTTGATAATCATTTTGATATAAAAGTCTGGACTACTGTGTCTTTAGATTTTGATATTTTGGAAATAACTAGAACTCTCCTTGAAACTGTCACTTCAAGAAACTGGGATACTAATGATCTTCATATTCTCAGAGCTGAGTTAAAGCAAAATCTACGGGGCAAAAGATTTTTGTTTGTGTTGGATGATGTGTGGCATGAAGTATATGATGACTGGATTCATCTGGTAAGTTCTTTTGTTGGAAAATCGGGAAGCAAGATGATCATCACAACACGTAACCATACATTTACAAGGACGGGAGGTACATTTCATACTTATACATTAGGTGCTCTATCGCGGGAAGAATCTTGGTCTTTACTCTCAACGTGTGCCTTTGGTTTTGATGGCTCTGCATACCCACAGCTAGAAAATATTGGCCAGAGCATTGCAAAAAAGTGTCGTGGAATGCCACTAGCTCTTAAAGCACTTGCAGGACTTCTACGTACTAATCTAGATATAGAGTATTGGGATGCAATTTTGACCAGTGATAAATGGGAATCACATGCGCATCATGTCATGCCTGCATTGCATGTGAGTTATCAGTATCTTCCTTCTCGCTTGAAAAGATGTTTCACTTATTGTTCCATTTTTCCAAAAGATTATCCACTTGACAGGAAGCAACTGGTTTTGTTGTGGATGGCAGAAGGATTTGCTGAGAAATCTCTAGATTTGAAAGACGCCGAAGAAATATGTGATGAGTTCTTTGATGAATTGATATCTAGATTCTTATTTCAACAATCAAATGATGATACTGAAGAAGAAAAGTTTGTCATGCATAACTTTATTAGGGAGCTAGCTACTTACGCAGCAGGAACGAGTTGTTGCCAGCTTGAATATAAAACTAGGATCTCTAAAAATGTTCGCCATTTATCATATAATCGTGAAAAGCATGACATTTCTATGAATTATGAGATTTTCCACAATTTCGAATGTCTGCGAACCTTTCTGCCAGTTGGCCCGTTGTGGGGACAAAATTGCTTATCTAGACAAGTGCTTGTTGATTTTTTACCCACTCTCATTAGATTGCGTGTGTTATCGCTTTCAGAGTATAGAAATATCAAAAAGCTACCGGATTCATTTGGCAATTTGACGCAGTTGAGGTATCTAGATCTTTCCAACACGGGAATCAAAAGTTTGCCGAAAACAATATGTAAACTATACAATTTGCAAACCTTGATTTTATCAAATTGTTATAGTCTCATTGATTTGCCATCACATATTGGAATGTTGATCAATTTACGTCACCTTGATATCAGTCGGACGAATATAAAAGAGATGCCAATGCAAATAATTGAACTAGAAAAACTTCGAACTCTAACTGTTTTTATAGTGGGTAAGGGTCAAGTCGGGTTAAGTATCAAAGAGCTCAGAAAATTTCCATACTTACAAGGTAAACTTACCATCTTGAACCTGCATAATGTCATTGATTCTATGGAGGCATTTGCTGCCAACTTAAAAAGAAAACAGCGAATTGAGGAGTTAGTGCTACAATGGGGTGAGCAAACTGAATACTGTGGAGCACAGTTAGCCGTGCTTGATATGTTGCAACCATCAATAACCTTGAAGAAACTGAGTATTAGCTACTATAGCGGAAAAATCTTTCCAAGTTGGTTGGGAGATTCTTCATTCTTTTACATGGTGTACCTTAGCATCAGTAATTGTGAATATTGCCTTACACTTCCACCACTAGGGCAGCTATCTTCTCTGAAGGATCTAAGGATAGATGGTATGAAGATATTGAAGACAATTGGCTCGGAGTTCTATGGCAAGGTAGGAGAAGGTTCTAATTCTTCATTCCAGCCATTTCCATCCCTACAGAATCTGCAATTTAGAAACATGTCAAGTTGGAAAGAATGGCTTCCCTTTGAAGGTGGAAAATTTCCTTTTCCTTGTCTCCAAACTTTGAGGTTGCGGAAGTGTCCTGAACTGAGAGGACATTTGCCCAACCATCCTCCTTCTTTAAAAGAAATCGTAATAATTGATTGTGGCCGTCTCCTGGAAACACCATCCACTCTGCATTGCCTCTCATCGTTGGAAAATAAAAATATTGTTTACCTAAAATGA 2745 0.3858 MAATSTTVGDAFLSAPIQTMIDKLISTDFRDYANNKKLNLSLLTQLQTALLALAPVLDDAEKMQIYNPGIKKWLDELKNVIFDTEDLLNQISYDSLRCKVTNQVQNFLSSLFNTNGDINSQIKSVCERLQLFAQQIDTIGLQTVSQKVLPMTHRSSRSSLNESLIVGRENDKEKLIKMLLSERDGESNNVGAVAIVGMGGLGKTTLAKLVYDDVEVDNHFDIKVWTTVSLDFDILEITRTLLETVTSRNWDTNDLHILRAELKQNLRGKRFLFVLDDVWHEVYDDWIHLVSSFVGKSGSKMIITTRNHTFTRTGGTFHTYTLGALSREESWSLLSTCAFGFDGSAYPQLENIGQSIAKKCRGMPLALKALAGLLRTNLDIEYWDAILTSDKWESHAHHVMPALHVSYQYLPSRLKRCFTYCSIFPKDYPLDRKQLVLLWMAEGFAEKSLDLKDAEEICDEFFDELISRFLFQQSNDDTEEEKFVMHNFIRELATYAAGTSCCQLEYKTRISKNVRHLSYNREKHDISMNYEIFHNFECLRTFLPVGPLWGQNCLSRQVLVDFLPTLIRLRVLSLSEYRNIKKLPDSFGNLTQLRYLDLSNTGIKSLPKTICKLYNLQTLILSNCYSLIDLPSHIGMLINLRHLDISRTNIKEMPMQIIELEKLRTLTVFIVGKGQVGLSIKELRKFPYLQGKLTILNLHNVIDSMEAFAANLKRKQRIEELVLQWGEQTEYCGAQLAVLDMLQPSITLKKLSISYYSGKIFPSWLGDSSFFYMVYLSISNCEYCLTLPPLGQLSSLKDLRIDGMKILKTIGSEFYGKVGEGSNSSFQPFPSLQNLQFRNMSSWKEWLPFEGGKFPFPCLQTLRLRKCPELRGHLPNHPPSLKEIVIIDCGRLLETPSTLHCLSSLENKNIVYLK* 915
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g2472 914 Gene3D - 324 405 IPR042197 -
Psa3g2472 914 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 158 421 IPR027417 -
Psa3g2472 914 Pfam NB-ARC domain 169 417 IPR002182 GO:0043531
Psa3g2472 914 PANTHER DISEASE RESISTANCE PROTEIN RP 76 897 IPR044974 GO:0006952
Psa3g2472 914 SMART LRR_typ_2 590 613 IPR003591 -
Psa3g2472 914 SMART LRR_typ_2 637 660 IPR003591 -
Psa3g2472 914 PANTHER - 76 897 - -
Psa3g2472 914 SUPERFAMILY L domain-like 484 911 - -
Psa3g2472 914 PRINTS Disease resistance protein signature 192 207 - -
Psa3g2472 914 PRINTS Disease resistance protein signature 265 279 - -
Psa3g2472 914 PRINTS Disease resistance protein signature 360 374 - -
Psa3g2472 914 PRINTS Disease resistance protein signature 611 627 - -
Psa3g2472 914 Gene3D - 406 495 IPR036388 -
Psa3g2472 914 Pfam Leucine rich repeat 568 624 IPR001611 GO:0005515
Psa3g2472 914 Pfam Rx N-terminal domain 22 105 IPR041118 -
Psa3g2472 914 Gene3D Ribonuclease Inhibitor 521 913 IPR032675 -
Psa3g2472 914 Gene3D - 150 314 IPR027417 -
Psa3g2472 914 Gene3D - 17 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g2472 Psa-Chr3 210916576 210921348 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g2472 189 810 WRKY Transcription Factor Family AT5G45050 23.939 1.17e-12 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g2472 - - mtr:MTR_3g032370 983.015