Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g2453 ATGGACAAGAAATTTCTAGTACCACTCTGCATTCTTTTGATGCTTCTCTCTGTTAAAGCTGCTCCTCGAAGATCTCTCATCACACATCTCCCTGGTTTTTCTGGCAAATTCCTCTCCCACCATTACTCAGGATATGTAAGTATTGATGGAAATGCTGAGACTGGAAAGAACCTGTTCTACTACTTTGTTAGTTCAGAAAGAAATCCCAGAAAAGATCCTGTTGTTCTATGGTTGAATGGTGGACCTGGTTGTTCAAGCTTTGATGGATTTGTTTATGAACATGGACCATTCAATTTCAAGGCAGCAGAATCAAAAGAGAACCTACCCACTTTGCATAACAATCCTTACAGCTGGTCTAAGGTTTCCAACGTTATATATTTGGATTCACCAACTGGTGTTGGGTTCTCTTACTCAAAAAACATAAGCAAGTATTCAACTGGGGACCTACAAACAGCTTCGGATACTCATGCTTTCCTCTTAAAGTGGTTTGAGCAATTTCCAGAATTCCAGGCCAATCCATTTTATATTTCTGGAGAGTCTTATGCTGGAATTTATGTACCCACTTTAGCTTTTGAAATTGCTAAAGAAATCCAGCATCGAACAAAGCCCGTGATCAATTTGAAGGGTTACTTGGTAGGAAACGGTGTCACGGACCCAAAATTTGACAACAATGCTTTTATCCCATTTGTGCATGGGATGGGCCTCATATCAGACACTATCTATGAGAATGTGCATGCTTCTTGCAAAGAAAACTACTACAATTCTGATTCTGAGAGTGATCAATGTGCTAAGAGCATGGAAAAAGTTAGTAAGGCTATTCAAGGGCTTAATGTGTACAATATATTAGAGCCATGCCACCATGATCCAGAAGTTGCAACAAACTTAAGTTCTAATTTGCCGTTGAGTTTCCAAAAATTAGGGTTAACAGAGAGACCTCTCCCAGTAAGAAAGAGGATGTTTGGTAGAGCTTGGCCTTTCAGAGCACCGGTTAGAGATGGTCCTGTTACCTTATGGCCTCAATTATTAGCCAACACCAGACACGTTCCTTGTGTCAGCGATGAAGTAGCAACATCGTGGCTAAACGACATTTCGGTCAGAAAAGCCATTCATGTTGATGTGGCAAGTGGTACGTGGGAATTATGTACTGATAGGATAAGTTTCGATCATGATGCTGGAGGCATGATTCCTTACCACAAGAATCTAACAAAATTGGGTTATAGAGCACTTATTTACAGTGGTGACCATGATATGTGTGTACCATTTACTGGAAGTGAAGCTTGGACAAGTTCTTTGGGGTACAAAACTGTGGATGAATGGAGGTCATGGAGCTCTAATGACCAAATTGCTGGATTCTTACAAGCTTATGAGAATAACCTTACCTTTCTCACAGTAAAGGGAGCTGGGCACACCGTACCGGAATATAAGCCAAGGGAGGCACTGGATTTTTACAGCCGTTGGTTGGATGGAAAATCAATTTAA 1479 0.4084 MDKKFLVPLCILLMLLSVKAAPRRSLITHLPGFSGKFLSHHYSGYVSIDGNAETGKNLFYYFVSSERNPRKDPVVLWLNGGPGCSSFDGFVYEHGPFNFKAAESKENLPTLHNNPYSWSKVSNVIYLDSPTGVGFSYSKNISKYSTGDLQTASDTHAFLLKWFEQFPEFQANPFYISGESYAGIYVPTLAFEIAKEIQHRTKPVINLKGYLVGNGVTDPKFDNNAFIPFVHGMGLISDTIYENVHASCKENYYNSDSESDQCAKSMEKVSKAIQGLNVYNILEPCHHDPEVATNLSSNLPLSFQKLGLTERPLPVRKRMFGRAWPFRAPVRDGPVTLWPQLLANTRHVPCVSDEVATSWLNDISVRKAIHVDVASGTWELCTDRISFDHDAGGMIPYHKNLTKLGYRALIYSGDHDMCVPFTGSEAWTSSLGYKTVDEWRSWSSNDQIAGFLQAYENNLTFLTVKGAGHTVPEYKPREALDFYSRWLDGKSI* 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g2453 492 Gene3D - 347 491 - -
Psa3g2453 492 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 12 491 IPR001563 GO:0004185|GO:0006508
Psa3g2453 492 PRINTS Carboxypeptidase C serine protease (S10) family signature 114 126 IPR001563 GO:0004185|GO:0006508
Psa3g2453 492 PRINTS Carboxypeptidase C serine protease (S10) family signature 127 137 IPR001563 GO:0004185|GO:0006508
Psa3g2453 492 PRINTS Carboxypeptidase C serine protease (S10) family signature 162 187 IPR001563 GO:0004185|GO:0006508
Psa3g2453 492 PRINTS Carboxypeptidase C serine protease (S10) family signature 459 472 IPR001563 GO:0004185|GO:0006508
Psa3g2453 492 Pfam Serine carboxypeptidase 31 489 IPR001563 GO:0004185|GO:0006508
Psa3g2453 492 SUPERFAMILY alpha/beta-Hydrolases 27 491 IPR029058 -
Psa3g2453 492 ProSitePatterns Serine carboxypeptidases, serine active site. 176 183 IPR018202 GO:0004185
Psa3g2453 492 Gene3D alpha/beta hydrolase 19 304 IPR029058 -
Psa3g2453 492 ProSitePatterns Serine carboxypeptidases, histidine active site. 459 476 IPR033124 GO:0004185
Psa3g2453 492 PANTHER CARBOXYPEPTIDASE 12 491 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g2453 Psa-Chr3 208855943 208860360 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g2453 355 492 Calmodulin-binding Proteins AT2G22960 47.482 7.43e-40 140