Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g2441 ATGGAAAGCCTATCTCAAAATAACACTTCTAGTTCTATCCCCTTCTTCTTTACACCATCTTTGCCAAATTACCCTTTGGAATCTCAAGATCAAGGACTAATTGGTGATATTGACTCATGGGGCAACTTTTTCTTAGGACAAAATAACAACAGCTTGCTTGTTGAGGATGCTAAGGAGACGTTATTGATGGATAATATTCAACAATGCACTTCTTCTAATATGGTGAGTAATATAAATGAAAGTGGGAGTTACCAACTACATGAGGAAGAGAAGAGAAGGAAATTAGAGGAGAAAAGGGTTAGAGGTGGGAGAGTGAAGAAGCCAACAAAAGTGCCAAGGTTTGCGTTTCAGACAAGAAGTGTTGATGATATTTTAGATGATGGTTATCGTTGGAGGAAATATGGACAAAAAGCTGTCAAGAACACAACATATCCCAGAAGCTACTATCGATGCACGCATCACACATGCAATGTGAAGAAACAAGTGCAAAGGCTGTCCAAAGATACTAGCATTGTGGTGACTACGTACGAGGGAATTCACAACCACCCATGCGAGAAGCTTATGGAAACCCTAACTCCTCTTCTAAAGCAAATTCAGTTTCTTGCTAGTTTGTAA 615 0.3935 MESLSQNNTSSSIPFFFTPSLPNYPLESQDQGLIGDIDSWGNFFLGQNNNSLLVEDAKETLLMDNIQQCTSSNMVSNINESGSYQLHEEEKRRKLEEKRVRGGRVKKPTKVPRFAFQTRSVDDILDDGYRWRKYGQKAVKNTTYPRSYYRCTHHTCNVKKQVQRLSKDTSIVVTTYEGIHNHPCEKLMETLTPLLKQIQFLASL* 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g2441 204 PANTHER WRKY TRANSCRIPTION FACTOR 43-RELATED 77 200 - -
Psa3g2441 204 Pfam WRKY DNA -binding domain 126 183 IPR003657 GO:0003700|GO:0006355|GO:0043565
Psa3g2441 204 SMART WRKY_cls 125 184 IPR003657 GO:0003700|GO:0006355|GO:0043565
Psa3g2441 204 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 77 200 IPR044810 GO:0003700
Psa3g2441 204 Gene3D WRKY domain 110 184 IPR036576 GO:0003700|GO:0006355|GO:0043565
Psa3g2441 204 ProSiteProfiles WRKY domain profile. 120 185 IPR003657 GO:0003700|GO:0006355|GO:0043565
Psa3g2441 204 MobiDBLite consensus disorder prediction 84 104 - -
Psa3g2441 204 SUPERFAMILY WRKY DNA-binding domain 119 184 IPR036576 GO:0003700|GO:0006355|GO:0043565
Psa3g2441 204 MobiDBLite consensus disorder prediction 84 103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g2441 Psa-Chr3 207722466 207723829 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g2441 90 204 WRKY Transcription Factor Family AT5G41570 71.304 4.31e-58 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Psa3g2441 WRKY 5.5e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g2441 - - cam:101497701 284.263
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g2441 3 207722466 207723829 Psa3g2441 3 207722466 207723829 ECH