Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g2436 ATGGCTTCTCATCTTTCTCTTCTTCGTGCTCCTCCTTTTTCAATTCCCACTAAAAACTTTCATTCCAAATATACTACCATAAAACCACTTAAACCCACCATCAATTTTCCTCCTTCTTCTTCTTTCTTTCATTGTTCTTCAATAGCATCACAAAGAGGATCTTGTTCATCACTGATTGCATGTTCCTCTTTAAATGGTAGAGGGCCAAATGATTCAGTGGATGATGGTGTTAAGAGCGTGGAACAACTTGTAGAAGAGAAACAACGTGCTGAACTGTCTGCTAGAATTGCCTCAGGAGAATTCACTGTAAAACAGGAATCTGGTTTACCTTCTATATTGAAGAAGAGCTTGTCAAATTTGGGAGTGTCCAATGAGATTTTGGAATTTTTATTTGGCCTGTATCCTAAAATTCCTGAGGCAAAAGGGTCGATTAAAGCCATTCGAAGTGAGGCTTTCTTTATTCCCTTGTATGAACTTTTCATCACATATGGTGGGATTTTCAGGCTTAATTTTGGTCCAAAGTCCTTTCTAATAGTATCGGATCCGGCTATTGCAAAACACATATTGAAAGACAATGCAAAGGCTTATTCTAAGGGTATCTTGGCTGAGATTCTTGATTTTGTAATGGGGAAAGGGCTTATCCCAGCTGACGGGGAAATATGGCGAGTTAGACGGCGTGCTATAGTTCCAGCATTGCATCTGAAGTTTGTAGCAGCTATGATTGGCCTTTTCGGACAAGCTACAGATAGGCTTTGCCAGAAGCTAGATACTGCTGCATCCGATGGAGAAGATGTTGAGATGGAGTCACTTTTCTCTCGATTGACGTTGGACGTCATTGGCAAAGCAGTGTTCAATTACGATTTTGATAGTTTATCAAATGATACTGGTATAATTGAGGCTGTGTATACCGTACTGAGAGAAGCAGAAGATCGAAGTGTTTCTCCGATTCCCATCTGGGATATCCCAATATGGAAAGACATATCCCCACGTCAAAGGAAGGTTGCCGCATCTCTCAAGCTTGTCAATGATACACTTAACAACCTCATCGCAATATGCAAGAGAATGGTGGATGAAGAAGAGCTCCAGTTTCATGAAGAGTACATGAACGAACAAGATCCAAGTATTCTTCACTTCTTGTTGGCGTCCGGAGATGATGTTTCAAGTAAGCAACTTCGCGACGACTTAATGACAATGCTCATTGCGGGACATGAAACATCGGCTGCTGTTTTAACTTGGACCTTTTATCTTCTTTCAAAGGAGCCTAGTGTCGTGTCGAAGCTCCAAGAAGAGGTTGACTCGGTACTTGGTGACCGGTTTCCAACTATTGAAGACATGAAGAAACTCAAATATACAACTCGAGTGATTAACGAGTCGTTGAGGCTTTATCCACAACCACCCGTGTTGATTCGTCGCTCTCTTGAAAATGACGTTCTTGGAGAATATCCTATAAAAAGAGGAGAAGATATTTTTATATCTGTCTGGAACCTACATCGCAGTCCAACCTTGTGGGACGGTGCTGATAAATTTGAACCGGAAAGATGGCCGTTAGATGGACCTAACCCTAACGAGACGAATCAAAATTTCAAATATCTTCCATTTGGTGGAGGTCCACGAAAATGTATAGGAGACATGTTTGCTTCATACGAGACTATAGTAGCTCTTGCAATGCTTGTTCGACGGTTCAACTTTCAAATGGCGGTTGGAGCTCCACCAGTTGTGATGACTACTGGAGCCACAATTCATACAACACAAGGATTGAATATGACTGTAACGCGCAGAATAAAACCTCCTATTGTGCCCTCGTTACAGATGTCGACATTGGAAGTGGATTCGTCCGCGAACATTTCAGATCAAGAGGAAATAGGTCAGAAAGGTCAAGTTTTTCAGGCTCAAAAGTCATGA 1902 0.4159 MASHLSLLRAPPFSIPTKNFHSKYTTIKPLKPTINFPPSSSFFHCSSIASQRGSCSSLIACSSLNGRGPNDSVDDGVKSVEQLVEEKQRAELSARIASGEFTVKQESGLPSILKKSLSNLGVSNEILEFLFGLYPKIPEAKGSIKAIRSEAFFIPLYELFITYGGIFRLNFGPKSFLIVSDPAIAKHILKDNAKAYSKGILAEILDFVMGKGLIPADGEIWRVRRRAIVPALHLKFVAAMIGLFGQATDRLCQKLDTAASDGEDVEMESLFSRLTLDVIGKAVFNYDFDSLSNDTGIIEAVYTVLREAEDRSVSPIPIWDIPIWKDISPRQRKVAASLKLVNDTLNNLIAICKRMVDEEELQFHEEYMNEQDPSILHFLLASGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKEPSVVSKLQEEVDSVLGDRFPTIEDMKKLKYTTRVINESLRLYPQPPVLIRRSLENDVLGEYPIKRGEDIFISVWNLHRSPTLWDGADKFEPERWPLDGPNPNETNQNFKYLPFGGGPRKCIGDMFASYETIVALAMLVRRFNFQMAVGAPPVVMTTGATIHTTQGLNMTVTRRIKPPIVPSLQMSTLEVDSSANISDQEEIGQKGQVFQAQKS* 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g2436 633 Gene3D Cytochrome P450 135 600 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa3g2436 633 PRINTS P450 superfamily signature 401 418 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa3g2436 633 PRINTS P450 superfamily signature 453 464 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa3g2436 633 PRINTS P450 superfamily signature 531 540 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa3g2436 633 PRINTS P450 superfamily signature 540 551 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa3g2436 633 SUPERFAMILY Cytochrome P450 148 593 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa3g2436 633 PANTHER - 135 597 - -
Psa3g2436 633 Coils Coil 80 100 - -
Psa3g2436 633 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 533 542 IPR017972 GO:0005506|GO:0016705
Psa3g2436 633 PANTHER CYTOCHROME P450 FAMILY 4 135 597 - -
Psa3g2436 633 Pfam Cytochrome P450 152 575 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa3g2436 633 PRINTS E-class P450 group I signature 160 179 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa3g2436 633 PRINTS E-class P450 group I signature 274 292 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa3g2436 633 PRINTS E-class P450 group I signature 390 407 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa3g2436 633 PRINTS E-class P450 group I signature 410 436 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa3g2436 633 PRINTS E-class P450 group I signature 452 470 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa3g2436 633 PRINTS E-class P450 group I signature 492 516 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa3g2436 633 PRINTS E-class P450 group I signature 530 540 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa3g2436 633 PRINTS E-class P450 group I signature 540 563 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g2436 Psa-Chr3 207326554 207330586 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g2436 66 616 Cytochrome P450 AT1G31800 80.605 0.0 917
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g2436 K15747 - gmx:100780770 1027.7