Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g2430 ATGGTTTCCCTCTCAACCAACCCTTTCTTTCGCCTCACTCCACACAAAAATACCCCCCCTTCTACTAGATTTCAACAAACAAACAACAACAACGCCAATCCCCACTCTAACAAAATTCGCAGAAAAGTTGTTTGTGCTTGCATCGCTCCTCCACGTAATTTCAACACCCAAGACTCTTCCGCCATTCAGTTCAATGGTTCATCCAAATCAGAACAATTAAACACAATTCGGGATCATGACGATGATTCTGATGTTCTTATTGAGTGTAGAGACGTCTACAAGTCTTTTGGGGAAAAGAAAATCTTAAATGGCATCAGCTTCAAGATCAGATATGGTGAAGCTGTTGGAATAATTGGTCCCTCTGGGACTGGCAAATCTACAATTTTGAAGATTATTGCGGGACTTCTTGCTCCGGACAAGGGAGAAGTTTATATTCGAGGTAGAAAGAGAAGTGGTTTGATAAGTGATGACGAGATATCAGGTCTTCGGATTGGCTTAGTGTTCCAAAGCGCGGCACTATTTGATTCTTTGACTGTTCGTGAAAATGTTGGTTTTCTCTTGTATGAACACTCAAGCATGCCTGAGGAACAAATATCAGAGCTTGTCAAGGAAACCTTGGCTGCAGTTGGTTTAAAGGGAGTTGAGGAACGGCTTCCTTCTGAGTTATCAGGCGGAATGAAAAAGCGAGTTGCTTTAGCTCGATCTATTATTTGTGACACCACAAAGGATTCATTAGAACCAGAGGTCCTCTTGTATGACGAACCGACTGCTGGACTTGATCCCATTGCATCTACTGTTGTTGAAGATCTGATTCGCTCTGTCCACATAAAAGGACGAGATGCACTTGGAAAACCTGGGAATATTACATCTTATGTGGTTGTTACTCACCAACACAGTACCATTAAAAGAGCCATTGACAGGTTGTTGTTTTTACACAAGGGAAAGGTTGTTTGGGAAGGAATGACTCATGAATTTACTACTTCAACAAATCCTATTGTTCAGCAGTTTGCATCCGGGAGCCTAGATGGTCCTATCAAATATTAG 1044 0.4176 MVSLSTNPFFRLTPHKNTPPSTRFQQTNNNNANPHSNKIRRKVVCACIAPPRNFNTQDSSAIQFNGSSKSEQLNTIRDHDDDSDVLIECRDVYKSFGEKKILNGISFKIRYGEAVGIIGPSGTGKSTILKIIAGLLAPDKGEVYIRGRKRSGLISDDEISGLRIGLVFQSAALFDSLTVRENVGFLLYEHSSMPEEQISELVKETLAAVGLKGVEERLPSELSGGMKKRVALARSIICDTTKDSLEPEVLLYDEPTAGLDPIASTVVEDLIRSVHIKGRDALGKPGNITSYVVVTHQHSTIKRAIDRLLFLHKGKVVWEGMTHEFTTSTNPIVQQFASGSLDGPIKY* 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g2430 347 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 87 338 IPR003439 GO:0005524
Psa3g2430 347 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 85 328 IPR027417 -
Psa3g2430 347 PANTHER PROTEIN TRIGALACTOSYLDIACYLGLYCEROL 3, CHLOROPLASTIC 25 347 - -
Psa3g2430 347 SMART AAA_5 111 315 IPR003593 -
Psa3g2430 347 ProSitePatterns ABC transporters family signature. 222 236 IPR017871 GO:0005524
Psa3g2430 347 CDD ABC_Org_Solvent_Resistant 87 336 - -
Psa3g2430 347 Gene3D - 73 339 IPR027417 -
Psa3g2430 347 Pfam ABC transporter 102 257 IPR003439 GO:0005524
Psa3g2430 347 PANTHER PROTEIN TRIGALACTOSYLDIACYLGLYCEROL 3, CHLOROPLASTIC 25 347 - -
Psa3g2430 347 MobiDBLite consensus disorder prediction 1 23 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g2430 Psa-Chr3 206792161 206801929 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g2430 93 331 Calmodulin-binding Proteins AT2G36910 28.906 1.70e-15 76.3