Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g2389 ATGAGCTCCAAGGAGAAACCCACTCTCGGTGGCACGCGGATTAAGACCCGCAAACGGAACATTGCGGCGCCTCTGGACCCTGCAGCATTTGCAGATGCAGTGGTCCAGATTTACTTGGATAATGCTGGTGATCTGGAACTTATTGCAAAAAGCCTTGAATCTTCTGACCTCAACTTCTCAAGATACGGCGACACCTTTTTTGAGGTTATTTTCACTGGGGGTCGCACACAACCTGGAACTACCAAGCCCGATGAGGGGGAACGCCATCCTTACTCCATAATAGAGTATGAGGCAAAACGTGAAGTCATTTTACGATCTGTGATCTACATTCAAAAGGTTTTGCGGAGAAGGCCATTCCTCATCAAGAACCTTGAAAATGTCATGCGTAGATTCCTCCAGTCCTTGGAACTTTTTGAGGAAAATGAGAGGAAGAAGTTGGCAATCTTCACAGCACTTGCCTTTTCCCAGAAGCTTTCTGGTCTCCCACCAGAGACTGTGTTCCAACCACTTCTTAAAGATAATCTTGTGGCCAAAGGGCTAGTTCTGACATTTATAACTGACTTCTTTAAGGAGTATTTGATAGACAACAGCCTTGATGATCTGATTGCAATTCTGAAACGCGGTAAAATAGAGGATAATCTTTTGGTCTTTTTCCCCCCTGCAAAAAGAACCAACGAGTCTTTCTCTGAGCATTTCAGCAAGGAAGGACTAACTGCCCTGGTGGAGTATAATGAAAAGAAAATATTTGAGGTGACACTGAAGGAAATGAAGTCTGCTTTAACAACACAGATAACTGAGGAGGCTGATATATCTGAAGTTATTGAGACCGTGAAGCTTCGGGTTAGAGATGCTAAGTTGCCAGAGACTGAGATTGTGCGGATCTTATGGGATGTTTTAATGGATGCTGTTCAGTGGTCAGGGAAAAATCAGCAACAGAATGCAAATGCAGCCCTGCGCAAGGTAAAAACATGGGCGGAACTGTTGAATGCTTTCTGCACCAGTGGAAAACTTGAGCTGGAACTGATGTACAAAGTACAGATGCAATGCTATGAGGATGCTAAACTGATGAAACTATTCCCTGAGATTATTAGATCTCTTTATGAACAGGATGTGCTGGCTGAAGATACCATCCTTCATTGGTTCCGTAAAGGAACAAACCCCAAAGGAAGGCAAACCTTTGTGAAGGCAATCGAACCTTTTGTTAATTGGCTGGAAGAGGCTGAAGAGGAAGAATGA 1236 0.4385 MSSKEKPTLGGTRIKTRKRNIAAPLDPAAFADAVVQIYLDNAGDLELIAKSLESSDLNFSRYGDTFFEVIFTGGRTQPGTTKPDEGERHPYSIIEYEAKREVILRSVIYIQKVLRRRPFLIKNLENVMRRFLQSLELFEENERKKLAIFTALAFSQKLSGLPPETVFQPLLKDNLVAKGLVLTFITDFFKEYLIDNSLDDLIAILKRGKIEDNLLVFFPPAKRTNESFSEHFSKEGLTALVEYNEKKIFEVTLKEMKSALTTQITEEADISEVIETVKLRVRDAKLPETEIVRILWDVLMDAVQWSGKNQQQNANAALRKVKTWAELLNAFCTSGKLELELMYKVQMQCYEDAKLMKLFPEIIRSLYEQDVLAEDTILHWFRKGTNPKGRQTFVKAIEPFVNWLEEAEEEE* 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g2389 411 Pfam eIF4-gamma/eIF5/eIF2-epsilon 338 411 IPR003307 GO:0005515
Psa3g2389 411 PANTHER BASIC LEUCINE ZIPPER AND W2 DOMAIN-CONTAINING PROTEIN 1 411 - -
Psa3g2389 411 CDD W2_eIF5C_like 217 404 IPR043510 -
Psa3g2389 411 ProSiteProfiles W2 domain profile. 246 411 IPR003307 GO:0005515
Psa3g2389 411 SMART 542_3 325 410 IPR003307 GO:0005515
Psa3g2389 411 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 1 411 - -
Psa3g2389 411 Gene3D - 253 407 - -
Psa3g2389 411 SUPERFAMILY ARM repeat 253 408 IPR016024 -
Psa3g2389 411 Coils Coil 121 141 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g2389 300 407 Eukaryotic Initiation Factors Gene Family AT2G34970 31.818 6.80e-09 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g2389 - - gmx:100789838 746.117