Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g2342 ATGGAGAAGAGATCAGTAGCTGCATTGTCCTTCCTCTTCCTCGTTCTCTTTGTTGCACAAGAAATCGCGGTGTGTGAGGCAAAAACTTGTGAGAATTTGTCTGCCAAATACAAGGGACCATGCTTCCTAAATGGTGGCTGTGACGATAATTGCAAAAACAAAGAGCGATTAGTTAGTGGCAGGTGCAGGGATGATTTTCGCTGCTGGTGCACTAAAAACTGTTAA 225 0.44 MEKRSVAALSFLFLVLFVAQEIAVCEAKTCENLSAKYKGPCFLNGGCDDNCKNKERLVSGRCRDDFRCWCTKNC* 75
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g2342 74 SUPERFAMILY Scorpion toxin-like 27 74 IPR036574 -
Psa3g2342 74 ProSitePatterns Gamma-thionins family signature. 28 51 IPR008176 GO:0006952
Psa3g2342 74 SMART gth_4 29 74 IPR003614 GO:0006952
Psa3g2342 74 Gene3D - 28 74 IPR036574 -
Psa3g2342 74 Pfam Gamma-thionin family 28 74 - -
Psa3g2342 74 PANTHER DEFENSIN 1 74 - -
Psa3g2342 74 PANTHER DEFENSIN-LIKE PROTEIN 1 1 74 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g2342 Psa-Chr3 201789188 201789742 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g2342 1 74 Plant Defensins Gene Families AT5G63660 42.667 3.17e-10 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g2342 - - gmx:100779239 125.176