Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g2333 ATGTCAGGAAAAAAAATTCTCAACTGTTTTCAATCTTCCTCTTCTAACAAACTCGTCCCCATTGCACTCTCCGCCACTGCCATAGCCGCCGTCGCTGTTATCATCTCCGGCTTCCTTTACTTTCGCCGACGCCGCTATAACCGTCGCGCTTCCACCGACAGCAAGACTCTAAGATCCGACAGTAGCCTTGAACTTTTCCCGCGCAATGTTGAAACTACCGTTGATGTCGGAGGAAACGCTTCCGAGTTTCTCTACCTTGGTACAGTCGTTAACTCGCGCCAAATTGACACCGTTCCTCCTCGTGGTGGCGCTTCGGTGTCACGAAAACTTAACTCGCCGGAGCTCCGTCCTCTCCCGCCGTTAGCGCGACTGCCCGAACCTCCACTACCACCCCCGCGTGGTAGCACCTATTCAGATGAAGAAGACGAGGAGTTTTACTCGCCGAGAGGCTCCTCTCTCGGCACCAGAGAAAGCTCAGGCGGTACAGGATCGGGTTCTCGGCGAGCATTCTCCGCCATAGGCGCTGGAAGAGGCGGAGAATCGAGCTCAATTTCTTGTTCTTCCTCTTCTTTCGGTTCTCCCGAGCAGTCTCTTTCGATTAGCCTCTCACCGCCGGCGAGTTCTAGTCCCCGGAGAACACAACAAAAATCACCTGAAACTACACCAATTCAGAACCAACATGTGCAATATTCTTCTTCTTCATCACGCTCAACACCAGAGAGAAATTTTGATGAAGAAAAGGAAAATGCTTCTATACCCTCAAATGCATCATCATCATCATCATCACTGTCATTACAAGAGAGATTCATGGAGAAAACTGAAAACGCTTCTTTATCAGAACAGCCACCAAGGCTATCGAATCATTCTAGTGCTTCATCTTCAGCTTTTTCTCTTCCTTCTTCACCTGAGAAAAACACGATGATGCATCAAGGTTTTGATCAGTCTCCAAGAATGTCAAGTGTTTCTGACGGGTTAAAGCTACCGGGTCTGTCATCATTACCATTGTCACCCGCCCTACTTTCATCCCCTGAAACAGAAAGAGGAGGGTTTAGCTGCAATCCAAACCAATGGGGAACATTTTCTTATGCTATGCCTGCGCCACAGAGGAAACATTGGGAGGTTCCGGTTCTTCCGAAGCCTATAGCTCCTCCACCACCTCCGCCTCTGCCACGGCAGAGGAGGCATTGGGAAATGTCAGCAACCTCGGCTATTGTTGATCAGCCTCGGTCGATTTTGAAGCCACCTGTGTTAGTACCTCCTTCGAGGCCTTTCGTGTTGCAAAACCAAACTACAAATGAGTCTTTGGGGGAAAATAATGAAGGGAATTCGAAACCTAAATTGAAGCCATTGCATTGGGACAAAGTGAGAACAAGTTCCGATCATGAGATGGTGTGGGATCAGATGAGTTCCATGTCGTTTAAATTGAATGAGGAAATGATTGAGACGTTGTTTGTAGTGAAGCCATCAAACCAAAACCCCAAGGATGCTACTCCACGTTCTGTTCTTCCCTTGCCAAATCAGGAGGACAGAGTACTTGATCCGAAGAAGTCTCAAAATATTGCAATCTTACTCAAGGCTCTTAATGTCACAATAGAAGAAGTGTGTGAAGCACTTTTAGATGGTGGTAGTGATACACTCGGAGCAGAGCTACTTGAAAGCTTGTTAAAAATGGCACCAACCAAGGAAGAAGAACGTAAACTAAAGGAACATAAAGATGAGTCGCCGACCAAGCTTGATCTTGCTGAGAATTTTTTGAAGGCGGTGCTTGATATACCTTTTGCATTCAAAAGGGTTGAAGCAATGCTTTACATGGTCAACTTTCAATCTGAAATAGAGTATCTTAGAAAATCATTTCAAACACTAGAGGTTGCTTGTGAAGAGTTGCGAAATTGTAGAATGTTCTTGAAGCTTCTAGAGGCTGTACTTAAAACTGGAAACCGAATGAATGTGGGAACAAATCGCGGTGATGCGGAGGCCTACAAACTCGATACACTTCTCAAGTTGGCTGATGTCAAAGGCGCAGACGGGAAAACCACTCTACTGCATTTTGTTGTGCAGGAAGTTATCAGAACCGAAGGCGCTCGTCTCTCTTCTACTGATCAAACTACAAACTCTACCTTGACCGATGATGTTAAGGGCAGGAGACTTGGCCTACAAGTTGTTTCTAATCTGAGTTGCGAGCTATCAAACGTAAAAAGGGCTGCTACTATGGATTCCAAACTTCTCAGCAGCGATGTCTCTAAACTTTCCAAAGGAGCTACAAACATAGCTGAGATCGTGCAATTAATCAAAAAGGCGAGATCAGATGAAACCAGTCAGAAATTTACAGAATCGATGAACAATTTCGTTAGAATGGCTGAGGAGGAAATCATGAAACTTCAAGCGCAAGAAACTGTTGCTTTGACCATTGTGAAGGAAGTTACAGAATATTTTCATGGGAACTTATCAAAGGAAGAAGCTCATCCATTAAGAATCTTCTTGGTTGTAAGAGATTTTATAGCGGTTCTCGACAGTGTCTGCAAAGAAGTAGGTATGATAAACGAGCGAACTACGGTTAGCTCGGCTCATAAGTTTCCTGTTCCGGTTAATCCAATGCTTCCACAACCTCTTCCTGGATTACATGAAAGGAAGCATTGTAGTAACTCTTCAGATGATGAAAGTTCATCACCTTAG 2673 0.4512 MSGKKILNCFQSSSSNKLVPIALSATAIAAVAVIISGFLYFRRRRYNRRASTDSKTLRSDSSLELFPRNVETTVDVGGNASEFLYLGTVVNSRQIDTVPPRGGASVSRKLNSPELRPLPPLARLPEPPLPPPRGSTYSDEEDEEFYSPRGSSLGTRESSGGTGSGSRRAFSAIGAGRGGESSSISCSSSSFGSPEQSLSISLSPPASSSPRRTQQKSPETTPIQNQHVQYSSSSSRSTPERNFDEEKENASIPSNASSSSSSLSLQERFMEKTENASLSEQPPRLSNHSSASSSAFSLPSSPEKNTMMHQGFDQSPRMSSVSDGLKLPGLSSLPLSPALLSSPETERGGFSCNPNQWGTFSYAMPAPQRKHWEVPVLPKPIAPPPPPPLPRQRRHWEMSATSAIVDQPRSILKPPVLVPPSRPFVLQNQTTNESLGENNEGNSKPKLKPLHWDKVRTSSDHEMVWDQMSSMSFKLNEEMIETLFVVKPSNQNPKDATPRSVLPLPNQEDRVLDPKKSQNIAILLKALNVTIEEVCEALLDGGSDTLGAELLESLLKMAPTKEEERKLKEHKDESPTKLDLAENFLKAVLDIPFAFKRVEAMLYMVNFQSEIEYLRKSFQTLEVACEELRNCRMFLKLLEAVLKTGNRMNVGTNRGDAEAYKLDTLLKLADVKGADGKTTLLHFVVQEVIRTEGARLSSTDQTTNSTLTDDVKGRRLGLQVVSNLSCELSNVKRAATMDSKLLSSDVSKLSKGATNIAEIVQLIKKARSDETSQKFTESMNNFVRMAEEEIMKLQAQETVALTIVKEVTEYFHGNLSKEEAHPLRIFLVVRDFIAVLDSVCKEVGMINERTTVSSAHKFPVPVNPMLPQPLPGLHERKHCSNSSDDESSSP* 891
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g2333 890 Gene3D Formin, FH2 domain 431 845 IPR042201 -
Psa3g2333 890 PANTHER FORMIN-LIKE PROTEIN 1 12 890 - -
Psa3g2333 890 MobiDBLite consensus disorder prediction 249 321 - -
Psa3g2333 890 Pfam Formin Homology 2 Domain 440 836 IPR015425 -
Psa3g2333 890 MobiDBLite consensus disorder prediction 178 238 - -
Psa3g2333 890 SMART it6_source 437 851 IPR015425 -
Psa3g2333 890 MobiDBLite consensus disorder prediction 871 890 - -
Psa3g2333 890 MobiDBLite consensus disorder prediction 98 323 - -
Psa3g2333 890 SUPERFAMILY Formin homology 2 domain (FH2 domain) 383 848 - -
Psa3g2333 890 PANTHER FORMIN-RELATED 12 890 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Psa3g2333 890 MobiDBLite consensus disorder prediction 118 134 - -
Psa3g2333 890 ProSiteProfiles Formin homology-2 (FH2) domain profile. 437 862 IPR015425 -
Psa3g2333 890 MobiDBLite consensus disorder prediction 151 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g2333 Psa-Chr3 201379378 201383467 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g2333 402 878 FH2 protein (formin) Gene Family AT3G25500 68.980 0.0 676
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g2333 - - gmx:100801837 915.99