Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g2328 ATGGCCGGCATAGACTTGGGTTCAGCATCACAACACTTTGTTCATCGTCTTCAACGCCCTGACCTAGAAGTTCATGATGAGAGTCAAGATCAAGATGGAAACAATAACCATGAAGGGCTTGATCTAGTTTCACCAAATCATGGTCTTGGTGATGTTGTTGGTCGTAGACCAAGGGGCAGACCTCCAGGCTCAAAGAACAAACCTAAACCTCCTGTGATCATTACAAGAGAGAGTGCAAACACGCTTAGGGCTCATATTCTTGAGGTTAGTAGTGGTTGCGACGTGTTTGACTCGGTCGCTACCTATGCGAGGAAGCGTCAAAGAGGGATCTGTGTTCTTAGTGGCAGTGGAACTGTCACTAACGTGACCCTGCGACAGCCAGCTGCCGCAGGATCTGTAGTGACACTTCATGGAAGATTTGAGATATTGTCTTTGTCTGGATCGTTTCTACCGCCCCCGGCTCCACCGGGGGCAACAAGTTTGAGTGTGTTTCTTGGCGGAGGTCAAGGTCAAGTCGTCGGAGGAAATGTTGTTGGCCCTTTGGTTGCTTCTGGACCGGTTATCGTTATTGCTTCGTCGTTTACTAACGTAGCGTACGAGAGGTTACCGTTAGATGAAGACGAATCTCTTCAGATGCAACAAGGGCAATCATCTGCAGGTGGTGGTGGTGATGGTGTTAATAACTCGTTTCCCGACCCGTCTTCGGGGCTTCCATTCTTCAACTTACCTCTAAATATGCCTCAATTACCTGTGGATGGTTGGAATGGAAACTCTGGTGGAAGACAATCTTATTGA 795 0.4805 MAGIDLGSASQHFVHRLQRPDLEVHDESQDQDGNNNHEGLDLVSPNHGLGDVVGRRPRGRPPGSKNKPKPPVIITRESANTLRAHILEVSSGCDVFDSVATYARKRQRGICVLSGSGTVTNVTLRQPAAAGSVVTLHGRFEILSLSGSFLPPPAPPGATSLSVFLGGGQGQVVGGNVVGPLVASGPVIVIASSFTNVAYERLPLDEDESLQMQQGQSSAGGGGDGVNNSFPDPSSGLPFFNLPLNMPQLPVDGWNGNSGGRQSY* 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g2328 264 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 1 264 - -
Psa3g2328 264 CDD DUF296 83 165 IPR005175 -
Psa3g2328 264 SUPERFAMILY AF0104/ALDC/Ptd012-like 79 210 - -
Psa3g2328 264 Pfam Plants and Prokaryotes Conserved (PCC) domain 83 196 IPR005175 -
Psa3g2328 264 Gene3D - 82 217 - -
Psa3g2328 264 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 1 264 IPR014476 GO:0003680
Psa3g2328 264 MobiDBLite consensus disorder prediction 24 49 - -
Psa3g2328 264 ProSiteProfiles PPC domain profile profile. 79 216 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g2328 Psa-Chr3 201237627 201240090 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g2328 1 261 AT-hook Motif Nuclear Localized (AHL) Family AT4G17800 64.452 8.01e-102 296
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g2328 - - gmx:100803960 416.772