Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g2320 ATGTTCTTCCTCCATTCTCTTCACCACCCCCAAACCCCATCTTATTATTCTCTATCTAATTCATCAAACACACTCACCCCTAACCGTTACCCTAACAGAAACGGTTACATCAAGTTCCGAACAACTCACCATGAAAATCTCCGTTACCTAAAATCACTAACCATAATCCACCCCGACACCAAACCCAACAACCTCCCTCTCCCCGACGCCGTCGACCACATCCTCACCACCGTCACTTTCTTCAAATCGCATTCCTTCTCCGACGCCGACATCCCCCGTCTCGTCCACCACTCTCCCCGCCTCTTCTCCACCTCCTTCAACCCCGCCGAAATCTCCCCCGTCTTCATCTTCCTCTCCGACGACCTCCTTGCCACCGCTGAAGAATCCCGCGGCCTCATCCTCCGTTGCCCTAAGCTCCTCTTCACCGATCCCAACCACATCCTAAAACCGACGCTCAACTTCCTCCGGGAAATCGGTATCCGCGGATTAAACCGGCCGTCTAACCGAAACGCGCATCTGTTAAACACGCGCGTGGAGAAGCTGCGACTGAGGGTGAGATTCATGGAGGAGGTGGTGGGGTTTTCTTACGAGGAAGCGACTAACGCGTGTGCGAGGTTGCCGGCGATATTGGGATACGACGTGGAGAATAATTTGTGGCCGAAATTTGTGTATTTGGTAAAGGAGATGGAGAGGGATTTGGAGGAGTTGAAGAAGTTTCCTCAGTATTTTGGGTTTAGTTTAGAGAAGAGGATTGTTCCAAGGCATTTGCATTTGAAGGAAAGAGGTGTTAGGATTCCATTGAATAGAATGTTGATGTGGGGTGATGACAAATTCTATGCCAAGTGGAAATGA 852 0.5012 MFFLHSLHHPQTPSYYSLSNSSNTLTPNRYPNRNGYIKFRTTHHENLRYLKSLTIIHPDTKPNNLPLPDAVDHILTTVTFFKSHSFSDADIPRLVHHSPRLFSTSFNPAEISPVFIFLSDDLLATAEESRGLILRCPKLLFTDPNHILKPTLNFLREIGIRGLNRPSNRNAHLLNTRVEKLRLRVRFMEEVVGFSYEEATNACARLPAILGYDVENNLWPKFVYLVKEMERDLEELKKFPQYFGFSLEKRIVPRHLHLKERGVRIPLNRMLMWGDDKFYAKWK* 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g2320 283 SMART mt_12 164 195 IPR003690 GO:0003690|GO:0006355
Psa3g2320 283 SMART mt_12 200 232 IPR003690 GO:0003690|GO:0006355
Psa3g2320 283 SMART mt_12 92 125 IPR003690 GO:0003690|GO:0006355
Psa3g2320 283 SMART mt_12 233 264 IPR003690 GO:0003690|GO:0006355
Psa3g2320 283 SMART mt_12 130 161 IPR003690 GO:0003690|GO:0006355
Psa3g2320 283 Gene3D Transcription termination factor 3, mitochondrial 58 283 IPR038538 -
Psa3g2320 283 PANTHER CGI-12 PROTEIN-RELATED 21 283 IPR003690 GO:0003690|GO:0006355
Psa3g2320 283 Pfam mTERF 130 278 IPR003690 GO:0003690|GO:0006355
Psa3g2320 283 PANTHER TRANSCRIPTION TERMINATION FACTOR MTEF1, CHLOROPLASTIC 21 283 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g2320 Psa-Chr3 200920516 200922138 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Psa3g2320 mTERF 2e-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g2320 K15032 - gmx:100812333 395.201