Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g2311 ATGGCCTCTTCTCCTACCGATTCAAACCCTCCTTCCGCCGTTCCCCTCCCACTTTCCTTACCTGCCCCACCACCACCAACCACCTCCCGTCGTCTTCCTCCACCCTGCTGGACACCTGAGGAAACATCTGCCCTAATCGATGCTTACCGTGACAAATGGTACTCCCTCGGCCGTACCAATCTCAAAGCCATCCATTGGCAGGAAGTTGCCGACGCTGTCACCGCTCGTTGCCCTAATGCTTCGCCCACCAATAAAACCGCCGTTCAGTGCCGTCACAAAATGGAGAAACTCAGGAAACGTTACCGATCTGAGATTCAACGGCTCAGATCTCTCCCGATTCCGCGATCTCGTTCTTCTTCCTCATGGGTTCATTTCAAATCCATGGATTCCATGGAAAAAGGTCCTTCTCCGCCTTCTCCACCTTCTCCACCACCAAAACTTGAAAATCATAACCATCTCAACCACCGTGAAACCCTAGTTGATAACGATGATCTCGACGATGACGATCTATACGAGGAACTCCGAAGCGCTGCTGGCGGAGGTTCTGGAAACAACAGAAATCTTGATAAATTCTACCGGAACGGATCTTCCGGCGGTGGATTCCGGATCCGGATCCCAACCGGTGTGAGTGTTGCACAACCTGGATCTAAATTCTACGGTGGCCACCATCAGAAAATGAACATGAATAGTAACCAGACGGAATCTGGTTCTCGCGGTTATATTAACGGTGGAACTAGGCTTGTGAAGGAGAAGATTGGGTTGGGGAAGAGAGAGAGGGAAAGAGAGGTAGAGAAAGAAAGAGACCCTACTGGTGAAATGGTGAATGCTATTAAGGTTTTGAGAGATGGCTTTGTGAGGATGGAGCATATGAAGATGGAGATGGCTAGAGAGATCGAAACGATGCGAATGGAGATGGAGATGAAACGAACTGAAATGATTCTTGAGTCTCAGCAGAGGATTGTTGAAGCATTCGCCAAAGCGGTATCGGAGAAGAACAAGAAGAGGAAACTACATAAGGGTAATAGTAACATCAACAACATAGCTTCGCCTTCGGAATCGTAG 1062 0.4887 MASSPTDSNPPSAVPLPLSLPAPPPPTTSRRLPPPCWTPEETSALIDAYRDKWYSLGRTNLKAIHWQEVADAVTARCPNASPTNKTAVQCRHKMEKLRKRYRSEIQRLRSLPIPRSRSSSSWVHFKSMDSMEKGPSPPSPPSPPPKLENHNHLNHRETLVDNDDLDDDDLYEELRSAAGGGSGNNRNLDKFYRNGSSGGGFRIRIPTGVSVAQPGSKFYGGHHQKMNMNSNQTESGSRGYINGGTRLVKEKIGLGKREREREVEKERDPTGEMVNAIKVLRDGFVRMEHMKMEMAREIETMRMEMEMKRTEMILESQQRIVEAFAKAVSEKNKKRKLHKGNSNINNIASPSES* 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g2311 353 Coils Coil 91 111 - -
Psa3g2311 353 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 21 336 IPR044823 -
Psa3g2311 353 MobiDBLite consensus disorder prediction 331 353 - -
Psa3g2311 353 MobiDBLite consensus disorder prediction 1 36 - -
Psa3g2311 353 Pfam Myb/SANT-like DNA-binding domain 35 131 IPR044822 -
Psa3g2311 353 MobiDBLite consensus disorder prediction 10 33 - -
Psa3g2311 353 ProSiteProfiles Myb-like domain profile. 37 98 IPR001005 -
Psa3g2311 353 Gene3D - 37 103 - -
Psa3g2311 353 PANTHER ALCOHOL DEHYDROGENASE TRANSCRIPTION FACTOR MYB/SANT-LIKE FAMILY PROTEIN 21 336 - -
Psa3g2311 353 SMART 118neu2 44 136 IPR006578 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g2311 Psa-Chr3 200545688 200548645 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g2311 36 144 Trihelix Transcription Factor Family AT3G14180 34.513 3.88e-14 71.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Psa3g2311 Myb_DNA-bind_4 1.1e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g2311 - - cam:101501151 493.812