Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g2293 ATGGAGAGTGCAGCCGAGCCGAAAGTACTTCCTCGGAACTTGCCTGTCCTGGTTGAGGTATCTGATGCAGATACATCTGTTGTAAGGGAAGCTAGTCAGAGGTTAATGTCGGGGCAGGATGTTTCGTCTGTGCGTGCGGTTTCGAAAGCACGGGATAGTTCTATGACGCGTCTGGCCTCCATTAGAGAAGCGGCGCAGTTATCAAATGCAGCAATTGTTTTGGCAAGAGAAGTTACACAATCCTCTCGAGAGCCTGTTTCCCCTACGCGTATAAGAACACTGAACGGAAACGCCTCTTTACATGATCGTGGAGAACTCTTGCCTGATGTTGAGACGTTGAAGAGAAGTACTGATTCTTTTGGGGAAAGTGGTCCGAGTTCATTTGCTGGTGCTAGTCACCCCCCAGAACCTGTTGATACCGATCTCATGAGAACGGTTTATATACCGATAGGTCGAAACAAACCCGAAGCTGGGTTGTACATGAAGGGTCCTTTCCTCGAAGATCTTTCAATCTGTAATCTCACTAAGAAACCAAGCGTAGCTGTTGTTTCGCCTGCAGAAAGTACTCTTGAAGAATCAAATGACATGGGGAAGTTAGCCTTGCCGGTTTCAGGTGCTCGTGCATCACAGAATAATAACGTGAATTCTCTATCTTGCCCAGATTCTGAGGAGAATGAATGCGTTTGGGATTCTTCTTTGCCTGCAAGTGGAAATGCCAGTCCATATAGTAGTATTGATAGTACTAGTGTTCTCAGAACAATGAGCATTGCTAATAGTTGTGCGAGTACGTTTCGGAGCGATGCATTCACTAGTGATGGCGTGATTAGTGTAGACAGAAATTGCGATAGTATTAAAGGAAGTGTAAGGGGGGATTCGCTCGAGAGTGCAAAAACTAGTGCTAGTCGTGCAAGTGATAGCAGTGGCCTCAGTGATGATAGCAACTGGAGTAACATCACCGGTAGTGCCAATAAACCACATAAAGGAAATGATCCTAGGTGGAAGGCTATCCTTGCTGTTCGAACACGGGATAGAATTTTGGGCATGAGTCATTTTAAGTTACTAAGACGACTTGGTTGTGGTGATATCGGAAGCGTGTATCTCTCTGAGCTGAGTGCAACTCGGTGTTATTTTGCAATGAAAGTTATGGACAAGGCATCCCTAGCTGCAAGAAAGAAGCTGGTTAGGGCACAGACAGAAAGAGAGATACTGCAGTTGCTCGACCATCCATTTTTGCCAACGTTGTACACACATTTTGAGACCGACCGGTTCTCGTGTTTGGTAATGGAATACTGTCCGGGTGGTGATCTGCATAATTTAAGGCAACGACAACCAGGGAAACATTTCTCAGAGTATGCTGCACGCTTTTATGCTGCAGAGGTCCTGTTAGCAATTGAATATCTTCACATGCTTGGAGTTGTTTATCGAGACCTTAAACCCGAAAATGTACTTGTTCGAGAAGACGGTCACATAATGCTCTCAGACTTCGATCTTTCTCTTAGGTGTGTTGTTTCGCCTACCCTTATCAGAACTCACGACAGCGACCCTTCAAAATGGGCAGCCGGTGGTGCATTCTGTGTCCAGCCTGCTTGTATTGAGCCTACCTCTGTATGCATCCAGCCTGTCTGTTTTATGCCTAAGCTTTTTTCTCAGAAAAATAAAAAATCACGGAAGCCTAAAGCGGATCCTGGCCTGACAACTAGTGCACTTCCAGAACTTCTTGCCGAGCCTACATCGGCCCGGTCGATGTCCTTCGTTGGCACACATGAGTATCTTGCCCCTGAAATAATCAAAGGAGAAGGTCATGGAAGTGCAGTTGATTGGTGGACATTCGGCATTTTCTTGCACGAGTTATTGTATGGTAAAACCCCTTTCAAAGGATCTGGAAACCGAGCTACGCTGTTCAATGTAGTAGGGCAGCAGCTCAAGTTTCCCGAGTCACCAGCTACGAGTTATGCCAGCCGGGATCTAATCCGAGGTTTGCTTGTGAAGGAGCCGCAGAACCGTCTTGGAGTGAAGAGGGGTGCAACTGAGCTGAAACAGCATCCTTTCTTTGAAGGCATAAACTGGGCGTTGATTAGGTGCAGCACACCACCGGAAATTCCAAGACAAATGGAAAATGAACTAGCGGCAAAGTTTGAAGCAGTTGATAATAATACGGTTGGCGTCGGGAGCAATAGTAAGAAAATGGTTGATGGTAATACCGAAACGAAGGCCGGGGGTGGTAAATATCTTGACTTTGAGTTCTTTTAG 2250 0.4609 MESAAEPKVLPRNLPVLVEVSDADTSVVREASQRLMSGQDVSSVRAVSKARDSSMTRLASIREAAQLSNAAIVLAREVTQSSREPVSPTRIRTLNGNASLHDRGELLPDVETLKRSTDSFGESGPSSFAGASHPPEPVDTDLMRTVYIPIGRNKPEAGLYMKGPFLEDLSICNLTKKPSVAVVSPAESTLEESNDMGKLALPVSGARASQNNNVNSLSCPDSEENECVWDSSLPASGNASPYSSIDSTSVLRTMSIANSCASTFRSDAFTSDGVISVDRNCDSIKGSVRGDSLESAKTSASRASDSSGLSDDSNWSNITGSANKPHKGNDPRWKAILAVRTRDRILGMSHFKLLRRLGCGDIGSVYLSELSATRCYFAMKVMDKASLAARKKLVRAQTEREILQLLDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHNLRQRQPGKHFSEYAARFYAAEVLLAIEYLHMLGVVYRDLKPENVLVREDGHIMLSDFDLSLRCVVSPTLIRTHDSDPSKWAAGGAFCVQPACIEPTSVCIQPVCFMPKLFSQKNKKSRKPKADPGLTTSALPELLAEPTSARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLKFPESPATSYASRDLIRGLLVKEPQNRLGVKRGATELKQHPFFEGINWALIRCSTPPEIPRQMENELAAKFEAVDNNTVGVGSNSKKMVDGNTETKAGGGKYLDFEFF* 750
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g2293 749 Pfam Protein kinase domain 352 501 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa3g2293 749 Pfam Protein kinase domain 581 684 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa3g2293 749 SUPERFAMILY Protein kinase-like (PK-like) 333 703 IPR011009 -
Psa3g2293 749 Gene3D Transferase(Phosphotransferase) domain 1 435 503 - -
Psa3g2293 749 PANTHER FLIPPASE KINASE 1-RELATED 78 749 - -
Psa3g2293 749 MobiDBLite consensus disorder prediction 292 324 - -
Psa3g2293 749 Gene3D Transferase(Phosphotransferase) domain 1 579 702 - -
Psa3g2293 749 Gene3D Phosphorylase Kinase; domain 1 703 713 - -
Psa3g2293 749 MobiDBLite consensus disorder prediction 292 327 - -
Psa3g2293 749 ProSiteProfiles Protein kinase domain profile. 351 684 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa3g2293 749 Gene3D Phosphorylase Kinase; domain 1 349 434 - -
Psa3g2293 749 ProSitePatterns Serine/Threonine protein kinases active-site signature. 472 484 IPR008271 GO:0004672|GO:0006468
Psa3g2293 749 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 78 749 - -
Psa3g2293 749 MobiDBLite consensus disorder prediction 115 136 - -
Psa3g2293 749 SMART serkin_6 351 684 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa3g2293 749 CDD STKc_phototropin_like 349 702 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g2293 Psa-Chr3 199490040 199493731 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g2293 49 749 AGC Kinase Gene Family AT2G44830 64.840 0.0 895
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Psa3g2293 Pkinase 2.7e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g2293 - - gmx:100800019 1165.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g2293 3 199490040 199493731 Psa3g2293 3 199490040 199493731 ECH
Psa4g5177 4 444170194 444174427 Psa3g2293 3 199490040 199493731 PCT