Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g2272 ATGAAACCTCTGTTTCATTCATCTTCTTTTTGCTTTTTCTCTTTGTCACTTTTGATGATCTTCATCATAAATATTCCAACATGTCTGTGTGAGGGTGATGAATATTACAAAAACTGTAACACCGCTTTTACCTGCGAAGACAACAAAGACCTCAAGTATCCGTTCTGGGGAGTAAACAGAGAAAGTTATTGTGGTAGTGTTGCTGATGGTATTAATACGATGCTTACATGCGAAGAAGAAGTTTCAAAGATCACAATCAATAACCTTAAATACCGTATTCTTGATTGGGACAATACAACACAGAAACTCACTGTTGCTAGGGACGATTACTGGAGTGGTAATGTTTGTGATGTGAATACTAATATCGAGAGCAGCACATTTGATAACACTCAATTTCAACGTTACAGTAATGATGTTGCTAACGTAACTCTCTTATATGGTTGCAATGTTGGAGTTGTGACTCCGTTTTATGATATTGGCTGTGGCGGAAGTGAAAATGTTGTCTACACCGTTGTTTATTCTGCTCCATTCTCTGCCTTCTGCACTCCGACTAGTACGGTGGTAATTCCGATTTTTGGAACCCAAGCTGTACAACTGGGAACTGGCAACGGAATACTGAGCGAGGCATTAAAAGATGGTTTTGAGTTGAGATGGATTGGAAATTACACGGAGTGCCGGAGTTGTGTTACTTCTGGTGGAGCGTGTGGGAATGATGGAGGTAATCAATTCAGATGTTTCTGCAATGATGGAGCTCATGCAACTTCATGTCATTCATCATTGCTCCCATCCACAAGTAATAGCTCTAGCAAGGGCGCTCTAATAGGTGGCGCAGTTGCAGGAGTTGCAGCCCTTGTTTGCATTCTTGGCTTTGCATGCTTAGTGGTGCGGAGAAGAAAGAAAAATGTTGAGAAATCTAGAAGCAGGGTCCTCTTTATGCCTCCTTCAAGCAGTGACATTGGCACTGGCACTGGCACTCTAACCTCCACTACTAATTCGTCTCAGAGCATTCCTTCTTACCCCTCTTCCAAATCGGACGCAATGCCGAAGAGTTTCTACTTTGGTGTTCAGGTGTTTACCTATGATGAGCTAGAAGAAGCTACCAACAATTTCGACGCCTCTAAAGAACTTGGAGATGGAGGTTTTGGCACAGTTTACAAAGGTGATCTCAAAGATGGACGCGTGGTTGCAGTGAAACGCCATTACGAAAGCAATTTTAAGCTTGTGGCGCAGTTCATGAATGAAGTTGAGATTCTAGCGAAGTTAAGGCATAAGAACCTTGTTACACTCTATGGATGCTCCTCTAAACACAGCAGAGAGCTTCTCCTTGTTTATGAATACATACCAAATGGAACAGTAGCTGATCATATTCACGGGAACCAATCAAGTTCATGTTTGCTTCCTTGGTCTCTTATATCGTCGTTACAAGCTGTGGATATTACCAGGCACCGCAGCGACGTGAACTTGGCGAATATGACTGTCAACAAAATTCAGAGCCAAGAATTACATGAGTTGGTTGACCCGTTTCTTGGATATGAAAAAGACAATGCTGTGAGGAGGATGACGACCGCAGTCGGTGAATTGGCGTTTAGATGTTTGCAGCAGCAAAGAGACATGAGACCTTCAATGGACGAGATTGTGGAGGTATTGAGAGCAATCAAGAGTGATGAACTTGAGACACAGGAATCAAAAGTTTTGGATGTTGTTGTTAGAACAGATGAACTTGTTCTTTTGAAGAAGGGTCCTTATCCAGCTTCACCAGATTCTGTTGCTAACAAATGGGTTAGCGGTTCTTCTACATCTACTTCTTCATAG 1812 0.4222 MKPLFHSSSFCFFSLSLLMIFIINIPTCLCEGDEYYKNCNTAFTCEDNKDLKYPFWGVNRESYCGSVADGINTMLTCEEEVSKITINNLKYRILDWDNTTQKLTVARDDYWSGNVCDVNTNIESSTFDNTQFQRYSNDVANVTLLYGCNVGVVTPFYDIGCGGSENVVYTVVYSAPFSAFCTPTSTVVIPIFGTQAVQLGTGNGILSEALKDGFELRWIGNYTECRSCVTSGGACGNDGGNQFRCFCNDGAHATSCHSSLLPSTSNSSSKGALIGGAVAGVAALVCILGFACLVVRRRKKNVEKSRSRVLFMPPSSSDIGTGTGTLTSTTNSSQSIPSYPSSKSDAMPKSFYFGVQVFTYDELEEATNNFDASKELGDGGFGTVYKGDLKDGRVVAVKRHYESNFKLVAQFMNEVEILAKLRHKNLVTLYGCSSKHSRELLLVYEYIPNGTVADHIHGNQSSSCLLPWSLISSLQAVDITRHRSDVNLANMTVNKIQSQELHELVDPFLGYEKDNAVRRMTTAVGELAFRCLQQQRDMRPSMDEIVEVLRAIKSDELETQESKVLDVVVRTDELVLLKKGPYPASPDSVANKWVSGSSTSTSS* 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g2272 603 ProSiteProfiles Protein kinase domain profile. 370 603 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa3g2272 603 PANTHER WALL ASSOCIATED KINASE-LIKE PROTEIN 12 469 - -
Psa3g2272 603 PANTHER WALL ASSOCIATED KINASE-LIKE PROTEIN 470 603 - -
Psa3g2272 603 SUPERFAMILY Protein kinase-like (PK-like) 346 471 IPR011009 -
Psa3g2272 603 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 12 469 IPR044652 -
Psa3g2272 603 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 470 603 IPR044652 -
Psa3g2272 603 Pfam Wall-associated receptor kinase C-terminal 184 250 IPR032872 -
Psa3g2272 603 Gene3D Phosphorylase Kinase; domain 1 342 446 - -
Psa3g2272 603 Gene3D Transferase(Phosphotransferase) domain 1 462 574 - -
Psa3g2272 603 Pfam Protein tyrosine and serine/threonine kinase 372 469 IPR001245 GO:0004672|GO:0006468
Psa3g2272 603 ProSitePatterns Protein kinases ATP-binding region signature. 376 398 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g2272 Psa-Chr3 197557275 197563617 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g2272 470 603 Receptor kinase-like Gene Family AT1G25390 43.262 3.23e-28 117
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Psa3g2272 PK_Tyr_Ser-Thr 2.5e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g2272 - - cam:101490779 376.711