Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g2236 ATGGCCTTACAGAACATTGGTGCTGGCAACAGTGATGATGCTTTCTACAGGTATAAGATGCCTAGAATGATCACGAAAATTGAGGGCAGAGGTAATGGCATCAAGACAAACATTGTCAATATGGTGGATATTGCAAAAGCTTTAGCAAGGCCAGCTGCATACACAACTAAGTATTTTGGTTGTGAACTTGGTGCACAGTCGAAATTTGATGAGAAAACTGGGACTTCTCATGTTAATGGGGCACATGATACTCCAAAACTTGCTGGTCTGCTCGAGAACTTCATCAAGAAATATGTCCAATGTTATGGGTGTGGAAATCCTGAAACTGAGATCTTAATTACTAGAAATCAAATGATCCAGTTGAAATGTGCTGCTTGTGGTTTTGTGTCTGACGTGGATATGAGAGACAAGCTGACCACGTTCATCATTAAGAACCCACCAGAAACAAAGAAAGGTTCCAAAGACAAGAAGGCCATGAGGAGAGCTGAGAAGGAGAGACTGAAGGAAGGTGAAGCAGCTGATGAGGAGCTGAAAAAGCTGAAGAAAGAGGTTGTCAAGAAGAAAGTAGCTCCTAAGGAAAGCACAACAAAATCAAGCTCTTCAAGGAAAAAAGGAAATGGCTCTGATGAAGATCGTCTGTCTCCTACTCGAAGCCCAACTGATGAAAAGGACGAGGCTGAAGATGAAGATGATGTGCAGTGGCAAACAGACACATCACTGGAGGCTGCTCGGCTACGTATTCAAGAACAGCTAAGTGCTGTGACAGCTGATATGGTTATGCTCTCAACGAATGAAGCAGAGGAGAAAGCAGCCTCTAAGGTAAGTGACAATCCTGATAATGGCAACTCCATGAACTACGAGACTCTTGTTACAGAAATCAAAGCTGATTTGAAGAAAGGTGTCAAGGCTAAAGAGTTGGTGGCCCACTGGGCAACACTTCCTGTTTCTCCACAAGAAAAGATGAGTGCTCTGTATGAAGCTCTTTTTGGGCACATTGAGAAAGCGTTTTCAAAAGCAGTACTTAAGAAGAAGGACTACCTTGCTGCTGCTGTCTCCAAGGAAGAGAGTATGCCATTGTTGCTGCTTCGAACAATTGAGGAATTTGCTGACAAGTCCGCTTCCAATTCCAGTCCACTTAAGGAGGTTGCCATGGTTGTAAAGGGGCTTTATGATGCTGATGCGTTGGAGGAAGAGCACATAATGCAGTGGTATCAAGAAGGGCTGAAAGGAGACAGGAAGGACTCTCAGGTTTGGAAGAATATGAAGCCTTTCATTCATTGGCTTCAGAATGCAGAATCAGAGTCGGAGGGAGAGTAG 1317 0.4381 MALQNIGAGNSDDAFYRYKMPRMITKIEGRGNGIKTNIVNMVDIAKALARPAAYTTKYFGCELGAQSKFDEKTGTSHVNGAHDTPKLAGLLENFIKKYVQCYGCGNPETEILITRNQMIQLKCAACGFVSDVDMRDKLTTFIIKNPPETKKGSKDKKAMRRAEKERLKEGEAADEELKKLKKEVVKKKVAPKESTTKSSSSRKKGNGSDEDRLSPTRSPTDEKDEAEDEDDVQWQTDTSLEAARLRIQEQLSAVTADMVMLSTNEAEEKAASKVSDNPDNGNSMNYETLVTEIKADLKKGVKAKELVAHWATLPVSPQEKMSALYEALFGHIEKAFSKAVLKKKDYLAAAVSKEESMPLLLLRTIEEFADKSASNSSPLKEVAMVVKGLYDADALEEEHIMQWYQEGLKGDRKDSQVWKNMKPFIHWLQNAESESEGE* 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g2236 438 MobiDBLite consensus disorder prediction 149 222 - -
Psa3g2236 438 SUPERFAMILY Zinc-binding domain of translation initiation factor 2 beta 98 133 IPR016190 GO:0003743|GO:0006413
Psa3g2236 438 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 1 438 IPR045196 GO:0003743|GO:0006413
Psa3g2236 438 SMART eIF2Bneu4 15 129 IPR002735 GO:0003743|GO:0006413
Psa3g2236 438 Gene3D - 105 145 - -
Psa3g2236 438 Pfam eIF4-gamma/eIF5/eIF2-epsilon 361 438 IPR003307 GO:0005515
Psa3g2236 438 SUPERFAMILY ARM repeat 285 432 IPR016024 -
Psa3g2236 438 ProSiteProfiles W2 domain profile. 276 438 IPR003307 GO:0005515
Psa3g2236 438 Gene3D - 3 104 - -
Psa3g2236 438 CDD W2_eIF5 319 436 - -
Psa3g2236 438 SUPERFAMILY Translation initiation factor 2 beta, aIF2beta, N-terminal domain 10 101 IPR016189 GO:0003743|GO:0006413
Psa3g2236 438 MobiDBLite consensus disorder prediction 149 233 - -
Psa3g2236 438 SMART 542_3 344 434 IPR003307 GO:0005515
Psa3g2236 438 Gene3D - 281 438 - -
Psa3g2236 438 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 5-1-RELATED 1 438 - -
Psa3g2236 438 Pfam Domain found in IF2B/IF5 11 127 IPR002735 GO:0003743|GO:0006413
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g2236 1 431 Eukaryotic Initiation Factors Gene Family AT1G36730 63.901 4.17e-176 498
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g2236 K03262 - gmx:100796346 609.372