Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g2224 GAAAAGCCAACCCTAAAAATGTTGTTCCATCATACGGGAGGAGTTCTGGTGTTCAACTTTTTTCCTCTTACCAAACGCAAGCTGCTACACCAGCTGTGAAGTTAACCCAGAAGCCATTGTTTTTGTTGACTCAAAAATTCGAGAATTGTTTCATTCGTGTTTTTTGCTTTTGGTCTCCTGAACTCTTGTGTATTCAGGTTATTGCTGATAATGTTGGTGATAATGTTGGTGATATTGGCCGTTCTGTGGGCCTCTTGTTTGTTTTCTCTACCACCTTATTTGCAACCGACTTTTTTGAGATCAAACTTGTAAAGGAAATTGAGCCAGCATTGAAAAAACAGCTTGTTATTTCAACAGTACTGATGACTGTTGAAATTGCAATTGCACTATTCTTGTGTGTTTCTGTTGGTCTTTGGGCAGGGCTTATCATTGATTTGTTACTGAATACGATATACCAAGCAATGCATACAGCCCTGTGCAAGATGTTGCTGATTCCTGGCAGACTGTGTATTGGTTTGCTGTTGATGGCACTTGGAATGTTGAGTACTATAGCAACCGGATTAGCCATCGATGCATATGGTCCAATCAGTGACAATGCCGGAGGTATTGCTGAGATGGCTGGAATGAGTCACAGAATTCGTGAGAGAACCGATGATCTTGATGCTGCAGGAAACACAACTGCTGCCAGTTGGAAAGGTTTGCTATTGGTTCTGCCCCTTGTGTCTTTTGGCCCTTTTTGGTGCCTTTGTGAGCCGTGCTGGTGTTACAACCGTCGATGTCCTGACTCCCAAGGTTTTCATCGGTCTGATTGTGGGCGCCATGCTCCCTTACTGGTTTTCTGCCAATGA 848 0.4328 KANPKNVVPSYGRSSGVQLFSSYQTQAATPAVKLTQKPLFLLTQKFENCFIRVFCFWSPELLCIQVIADNVGDNVGDIGRSVGLLFVFSTTLFATDFFEIKLVKEIEPALKKQLVISTVLMTVEIAIALFLCVSVGLWAGLIIDLLLNTIYQAMHTALCKMLLIPGRLCIGLLLMALGMLSTIATGLAIDAYGPISDNAGGIAEMAGMSHRIRERTDDLDAAGNTTAASWKGLLLVLPLVSFGPFWCLCEPCWCYNRRCPDSQGFHRSDCGRHAPLLVFCQ* 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g2224 281 Pfam Inorganic H+ pyrophosphatase 116 234 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Psa3g2224 281 PANTHER K(+)-INSENSITIVE PYROPHOSPHATE-ENERGIZED PROTON PUMP 171 235 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Psa3g2224 281 PANTHER PYROPHOSPHATE-ENERGISED PROTON PUMP, PYRIDOXAL PHOSPHATE-DEPENDENT TRANSFERASE-RELATED 81 128 - -
Psa3g2224 281 PANTHER PYROPHOSPHATE-ENERGISED PROTON PUMP, PYRIDOXAL PHOSPHATE-DEPENDENT TRANSFERASE-RELATED 171 235 - -
Psa3g2224 281 PANTHER K(+)-INSENSITIVE PYROPHOSPHATE-ENERGIZED PROTON PUMP 81 128 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g2224 Psa-Chr3 193377313 193379428 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g2224 66 245 Primary Pumps ATPases AT1G15690 44.366 1.95e-52 179
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g2224 K23025 - tcc:18595335 182.57