Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g2194 ATGATTAGGGATTCAGGAAAGTGGGTGGTGCTAATAGTAACAGTTTGGATACAAGCATTCACTGGGACAAACTTTGATTTCTCATCATACTCATCTGAGCTGAAATCAGTTCTTGATATAACTCAGGTTCAGCTGAATTGTCTTTCAGTTGCATCTGATATGGGGAAGGCGTTTGGGTGGTGTTCTGGTGTTTCGCTCATGTATTTTCCGTTGTGGGTGGTTATGTTCATGTCTGCTTTTTTGGGGCTTCTTGGTTATGGCTTCCAGTGGCTTGTTATTCAAAGATTGATTACTTTGCCTTACTTTCTGGTATTTTTCCTATGCTTGGTTGCAGGATGTAGCATTTGCTGGTTCAACACAATCTGTTATGTATTATGCATAAAAAATTTCACAACTAACCGTTCACTTGCGTTATCTTTAAGCATAAGTTTCAATGGTGTAAGCGCAGCTTTCTACACTCTCATTGCCAATGCAATAAACTCAAACAATGACACTCTCTATCTCTTACTCAATGCCATTGTTCCTCTCCTCATTTCAGCATTAGTACTCATTCCAATTCTCCAACAACAACCACAACCTCAGCAACAACATTCCGCCGACACACTTAACCTCCGCGATTCCGTAGTTTTTCTTTGCCTCAACATCCTTGCACTTGTCACAGGCCTTTACCTTCTCTTCCTATATTCCCTCTCGTCATCGTCCCTGACCGTCGCTCGCGTTATCCTTGCTGGCGCGATTTTTCTCTTAGCAGTGCATTTTCTGTTGCCAAGCATTGTGAATTTGAAAGAATGGTCTTGTTTTACTCTGCCTACAATTTTCACTCTTGTTGACAATAACGATGATAACGGGCTTCACAAAGAACTCATTTGTAAGGAGGGTAATGATGCAAGGAGTAACGGAAGTGTACACAGCATGATGATTGAGAAGAGCTTTTGTCTTGTGAGTGTGTTGGAGAAGGAAAAGATTACAATGCTTGGTGAAGAACATACGACTAAGATGTTGATTCGTAGGTGGGATTTTTGGTTATATTACATTGCTTATTTCTGTGGAGGAACAATTGGATTGGTTTATAGTAATAACTTGGGACAAATTTCTCAATCACTTGGATATAACTCTGAGACAAGTTCTCTTGTGACACTTTACTCCACATGTTCCTTTTTCGGTCGGCTTCTTGCAGCCGCACCCGACTTATTCCGCAGCAAGACACAGATTGCAAGAACTGGATGGTTTGCAGCAGCCTTGATACCAACACCGATTGCATTCATTTTACTAGCCATATCCGGTACTAAAACGGCGTTACAATTAAGCACAAGCTTAGTTGGATTAAGCTCCGGCTTTGTGTTTTCTGCAGCAGTATCTATAACATCAGAGCTATTTGGTCCAAACAGTGTTGGTGTGAACCACAACATCCTCATCACAAACATTCCTTTAGGTTCATGTCTTTATGGCCTTCTTGCAGCATTGGTTTATGACTCTAATGCTACGAGTTCAGGACAATCGATATGGCTGCGCGAGATGTCTATGTGCATGGGAAGGAAATGCTATATGCAGACATTTATATGGTGGGGTTGCATTTCCATTGTTGGATTGGTTTCAAGTTTCTTGCTTTTCTTAAGGACTAAGCAAGCTTATGACAGTTTTGAAAGAAATAAGAATAGCAACAGAATACAGGGAAATTAG 1680 0.4083 MIRDSGKWVVLIVTVWIQAFTGTNFDFSSYSSELKSVLDITQVQLNCLSVASDMGKAFGWCSGVSLMYFPLWVVMFMSAFLGLLGYGFQWLVIQRLITLPYFLVFFLCLVAGCSICWFNTICYVLCIKNFTTNRSLALSLSISFNGVSAAFYTLIANAINSNNDTLYLLLNAIVPLLISALVLIPILQQQPQPQQQHSADTLNLRDSVVFLCLNILALVTGLYLLFLYSLSSSSLTVARVILAGAIFLLAVHFLLPSIVNLKEWSCFTLPTIFTLVDNNDDNGLHKELICKEGNDARSNGSVHSMMIEKSFCLVSVLEKEKITMLGEEHTTKMLIRRWDFWLYYIAYFCGGTIGLVYSNNLGQISQSLGYNSETSSLVTLYSTCSFFGRLLAAAPDLFRSKTQIARTGWFAAALIPTPIAFILLAISGTKTALQLSTSLVGLSSGFVFSAAVSITSELFGPNSVGVNHNILITNIPLGSCLYGLLAALVYDSNATSSGQSIWLREMSMCMGRKCYMQTFIWWGCISIVGLVSSFLLFLRTKQAYDSFERNKNSNRIQGN* 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g2194 559 Pfam Nodulin-like 7 253 IPR010658 -
Psa3g2194 559 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 4 553 - -
Psa3g2194 559 Gene3D MFS general substrate transporter like domains 314 537 IPR036259 -
Psa3g2194 559 PANTHER NODULIN-LIKE/MFS TRANSPORTER 4 553 - -
Psa3g2194 559 SUPERFAMILY MFS general substrate transporter 8 542 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g2194 Psa-Chr3 192137450 192140797 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g2194 7 553 Nodulin-like Gene Family AT1G31470 54.463 0.0 536
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g2194 - - mtr:MTR_7g083660 898.656