Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g2185 ATGGCTCCGTCATCAGAAACTTCCGTCCGTAAAAACATGATTCCTTCATTTCTCTACGGTTCTTCCCCTAAAACCCTACCGGTTATTCACCAGATCATCAGTTCCGGTCCCGCTCCTTCCGCCGCGGCGTCGCCTTCATTGACTGGAACTCGATCTTTCATGATTCCTTCTCCTAAGGAATCCGGTAAGATCGAGATGTACTCGCCGGCTTTCTATGCTGCTTGTACCGCTGGTGGAATTTTTAGCTGTGGTCTTACTCACATGACCGTCACTCCTCTTGACCTTGTCAAGTGTAATATGCAGATTGACCCTGCCAAGTACAAGAGTATCTCATCAGGATTTGGAGTTTTGCTCAAGGAGCAGGGAGTTAAGGGCTTTTTCCGTGGCTGGGTGCCTACCTTGCTTGGTTACAGTGCACAGGGTGCTTGCAAATTTGGATTCTATGAGTTCTTTAAGAAGTACTATTCTGATATTGCTGGTCCAGAGTATGCAAACAAGTACAAGACCTTGATCTACCTTGCTGGTTCAGCATCTGCTGAGGTTATTGCCGATGTTGCACTTTGCCCATTCGAAGCTGTGAAAGTACGTGTTCAAACTCAACCTGGTTTCGCAAGAGGTCTTGGTGATGGACTCCCAAAATTTGTCAAATCTGAAGGAGTTTTGGGGCTGTACAAGGGATTAGTGCCTCTATGGGGACGACAAATTCCATACACAATGATGAAATTTGCCTCTTTTGAGACCATTGTTGAGCAAATCTATAAACATGCCATCCCCAGACCAAAGAGCGAGTGCAGCAAATCTCTGCAACTTGGTGTCAGTTTTGCTGGTGGATATGTTGCTGGTGTTCTTTGTGCAATTGTGTCTCACCCTGCTGATAACCTTGTCTCTTTTCTAAACAATGCTAAAGGTGCCACAGTTGGTGATGCTGTTAAGAAGTTTGGTGTGGTGGGTCTTTTCACCCGAGGTCTCCCTCTCCGTATTGTTATGATTGGAACACTTACAGGAGCCCAGTGGGGAATATATGATGCTTTCAAAGTCTTTGTGGGGCTGCCAACAACTGGTGGTGCGGCTCCTCCTGCTGAGATCGTAAAGGCATAA 1098 0.4645 MAPSSETSVRKNMIPSFLYGSSPKTLPVIHQIISSGPAPSAAASPSLTGTRSFMIPSPKESGKIEMYSPAFYAACTAGGIFSCGLTHMTVTPLDLVKCNMQIDPAKYKSISSGFGVLLKEQGVKGFFRGWVPTLLGYSAQGACKFGFYEFFKKYYSDIAGPEYANKYKTLIYLAGSASAEVIADVALCPFEAVKVRVQTQPGFARGLGDGLPKFVKSEGVLGLYKGLVPLWGRQIPYTMMKFASFETIVEQIYKHAIPRPKSECSKSLQLGVSFAGGYVAGVLCAIVSHPADNLVSFLNNAKGATVGDAVKKFGVVGLFTRGLPLRIVMIGTLTGAQWGIYDAFKVFVGLPTTGGAAPPAEIVKA* 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g2185 365 ProSiteProfiles Solute carrier (Solcar) repeat profile. 268 347 IPR018108 -
Psa3g2185 365 ProSiteProfiles Solute carrier (Solcar) repeat profile. 167 251 IPR018108 -
Psa3g2185 365 PANTHER SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED 6 361 IPR044677 GO:0005315|GO:1990547
Psa3g2185 365 ProSiteProfiles Solute carrier (Solcar) repeat profile. 70 154 IPR018108 -
Psa3g2185 365 Gene3D Mitochondrial carrier domain 70 348 IPR023395 -
Psa3g2185 365 SUPERFAMILY Mitochondrial carrier 73 343 IPR023395 -
Psa3g2185 365 Pfam Mitochondrial carrier protein 73 156 IPR018108 -
Psa3g2185 365 Pfam Mitochondrial carrier protein 169 255 IPR018108 -
Psa3g2185 365 PANTHER MITOCHONDRIAL PHOSPHATE TRANSPORTER 6 361 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g2185 Psa-Chr3 191086819 191091048 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g2185 8 362 Chloroplast and Mitochondria Gene Families AT5G14040 79.019 0.0 575
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g2185 K15102 - gmx:548006 612.838
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g2185 3 191086819 191091048 Psa3g2185 3 191086819 191091048 ECH
Psa1g2220 1 169213645 169216607 Psa3g2185 3 191086819 191091048 ECH