Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g2170 ATGTCCATCTTGCCCTCACAAACCCAACCGGCATCTTCATCATCTTCGTCTTTACCAATCCCTAGCCCTAATTCACAACATGGAATTTCAGATACTTCCTCTTCTCTTTCCCCTCAACTCAACCATGCTCTCGGATCTCTTCAGATCTCCGACTATCCAGGTCCATCAACTCCAGCTGCAGAAGATTCCGGTGGACCCTCCGAAAAGGTGACTGAATTAGAGTGTCCGTTGTGCTTTGTGATGATATCTGTCAAGGACTTATATTCAGTTCACATCACAAATGTCAAACAATATCAAGTAGGAGATAATATTGAGTTCACTTTCTTAACGAGGAAGAAGGATTCATTTACTCTCTCACATAAAAATAAACAAGAGACTGATAACTCATCATGTGGCCAAGGAGATGTATGTGACCCATTTTCTAAGTTCAGACTCACATTAGATGTAGATCTCTCAGTGAGACATGCAATATCAGATCTAGATGGTTGGCTGGCCAGAGCTGATTCAGGTCTTGTCGATGACCTGGAGAAGCTTCCATATGTTAGTGCTGCAATGCAACAACTAAAACAGAGAAAGAAGTATTGGAATGAGCACAGGGCTTCTAACAGTGAAAAATCTTCTAGCCTCATTGATTATGCACTCCAGGTACCATCAATATCTGCAAATGCTGTGGATACTGATGACGAAAACTGTTCTAGTGAATCAAGAACTTCCTCTACTGATTTCCCCGATCAAAGCAAGGTTGTAGCAATGGATAAATCAACTGCTGGAAGCTGTCAGGATGAAATTTTGGACCTGGAAAAGTTACTAGTCGAGCAGGAAATGAACTCGTCTTCTTCATATGAGGAGAAAAAATGTATTCAAGGCCATTCAAATGGCATTGGAGATGCAAAGGAAAATGACTCTTACAATTTTTATCAGGCTGCTGATGGGCAACATCTAATTCTTCATCCTTTGAACACCAAGTGTTTACTGCACCATTATGGTAGCTATGATAAGCTCCCTCACAGAATAAGTGGAAGGATTCTACAATTGGAGACAGTTACTCAATCTGAGGCTGTGAGAAGGCGGTATCGATTTTTAAGTCATTTTCCATTAACCACAACTTTTCAGCTTTGTGAAGTTGATTTGAGTGAGATGTTACCTCCTGAAGCACTGGCCCCATTTTTGGATGAAATAAAGAACCGTGCAAACCAGAGGAAGCAACTTGCAAAGAAGGAACTGAAAGAAAAATTAAAGGCTGAAGCTACTTCTAATTATGCTCTTTCCATGTCAACCCACTCTCAGTTTATTTCTCGTGATGATCCTCCCACGTTCTCCATAGACGACTTTGAAGCTCTAGGAAATTCCACTCTGTCATCAAGTCCTCAAGTTGTTGGTGAGAGGAAATTGTTCTCAAGTGTGACTAGGCTTGGTTTTGCTGCTGCTCATGATTCTCCATCCTTTCAAGCTCAAGAAACTAGCGATTTACATAATAACAATTCGATTGCGGATTCTTCTGGTACACCAGGTTTGAGGAACGGAGAGACACTATCATACTCCAATGTCATATCTAGAGCAGAATCTAATGGAAGTTCAAATGCACCGAAGACAAATGACTCGGGAAAGAAGGGAAAGAAACCAAATCGAGTTCTCTTGTCAACAGCTGGCGGCAGGCGTTATTGA 1665 0.4138 MSILPSQTQPASSSSSSLPIPSPNSQHGISDTSSSLSPQLNHALGSLQISDYPGPSTPAAEDSGGPSEKVTELECPLCFVMISVKDLYSVHITNVKQYQVGDNIEFTFLTRKKDSFTLSHKNKQETDNSSCGQGDVCDPFSKFRLTLDVDLSVRHAISDLDGWLARADSGLVDDLEKLPYVSAAMQQLKQRKKYWNEHRASNSEKSSSLIDYALQVPSISANAVDTDDENCSSESRTSSTDFPDQSKVVAMDKSTAGSCQDEILDLEKLLVEQEMNSSSSYEEKKCIQGHSNGIGDAKENDSYNFYQAADGQHLILHPLNTKCLLHHYGSYDKLPHRISGRILQLETVTQSEAVRRRYRFLSHFPLTTTFQLCEVDLSEMLPPEALAPFLDEIKNRANQRKQLAKKELKEKLKAEATSNYALSMSTHSQFISRDDPPTFSIDDFEALGNSTLSSSPQVVGERKLFSSVTRLGFAAAHDSPSFQAQETSDLHNNNSIADSSGTPGLRNGETLSYSNVISRAESNGSSNAPKTNDSGKKGKKPNRVLLSTAGGRRY* 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g2170 554 MobiDBLite consensus disorder prediction 223 244 - -
Psa3g2170 554 PANTHER RING FINGER 10 FAMILY MEMBER 73 550 IPR039739 -
Psa3g2170 554 MobiDBLite consensus disorder prediction 498 532 - -
Psa3g2170 554 Coils Coil 390 414 - -
Psa3g2170 554 MobiDBLite consensus disorder prediction 498 554 - -
Psa3g2170 554 MobiDBLite consensus disorder prediction 1 37 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g2170 Psa-Chr3 190547168 190553635 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g2170 75 488 C3H Transcription Factor Family AT3G26730 52.093 9.76e-135 407
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g2170 - - gmx:100798764 756.903
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g2170 3 190547168 190553635 Psa3g2170 3 190547168 190553635 ECH