Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g2157 ATGGGTCATGTTTTTCTAACTCTTTTTCAGTTTCTTCTCCTTCACCCCTTTCTCTTCACCCTTCACGCAAATGCCATCAATCCTTCGATTCCCAAAGACGCATTGTCTCTTCTCACCTTCAAACACTTCGTCTCTTCAGACCCTTCGAATCTTCTCTCCAGTTGGACCTACCGCTCATCCTCCACATTCTGCCGCTGGCATGGCGTCACTTGCGGCGGGAGACGAAACAGAAGAGTGATTTCGCTTCATGTCACCGGTCTACGCGGCGGTGAACTGGCTTCTTCCATCGGAGAGTTGTCGGAGCTTCGAGTTTTGTCAATTCCCGGAAACATGTTCTCTGGCGAAATTCCGGTGAGTTTGATGAATCTCCGGGGACTTGAGGTTCTTGAGGTTCAAGGTAACTACTTTTCAGGGAATGTTTCTTTTCAGATGAGTTATCTTGAATCGCTTAAACTTGTTAATCTCTCTGGTAATGCTTTTTCTGGTTCTATTCCGAATGGGTTTATTTTTTCTAGGAATGTGGAAATTGTTGATTTGTCTGATAATGAGTTTTCTGGTTCGATTCCTGTGAATGATTCTGTTGGTTGTGATTCTTTGAAGCATTTGAAACTGTCTGATAATTTTTTGACTGGTGAGATTCCACCTCAAATTGGGAAATGTAGAAACTTGAGGACGCTTTTGGTTGATGGGAATATATTGGAAGGTAAAATCCCTCTTGAGATTGGGCTTGCTGTTGAACTTAGAGTTCTTGATGTTTCGCGAAACAGCCTCACCGGTAGAATCCCGAAACTGTTAGGTAATTGTTTGAAGTTGTCTGTGCTTGTTCTTACTGATTTGTTTGATGATCGCGGAGATTCTGACGCGGGAAGTTTGTTTGAGGATAAATTTAGAGGTGAATTCAATGCTTTTGTTGGGAATATTCCTCATGCAGTGTTGTCGCTTTCGAGTTTGGAGATTTTGTGGGCCCCGAGAGCGAATCTCGCTGGACGGTTACCTGCTGAATGGACAGATTCATCATGCTCTCTTAGAATACTTAATTTGGCTGAGAATTATGTTACTGGTGTCGTGCCCGCGAGTTTAGGGATGTGTCGGAATTTGACTTTCTTGGACTTGAGTTCTAACAATTTAGCGGGAAATTTGCCGTTGGATCAGCTCCGTGTTTCTTGTATGATGTATTTCAACGTAAGCAGGAATAATGTCTCTGGCTTGCTTCCAGATTTTCGGAAAGAAACGTGTCGATCGAGTAGTAACGCCTTTGCTGCACTAGAATCTGTGTTTCTAGAATTGGATGGTTTGAATGATAAATACTTTAACGTCCGTGTTTTGAGATTTCAAGAGAAGGCTTTTGTCGGATTAGGTTTCGAAGATTCTACTGTCGTTATTCATGATTTCAGCTGGAACAGTTTCGTTGGATCTTTACCGTTGTTCTTTGTTGGAGGTAATCTTTTTACCGCAAATCGCAAAGTATCGTACATGCTGTCTTTGAATAATAATAAATTCAACGGAACTCTTCCGAATCAGCTAGTTTCAAACTGTAATGACCTCAAGATATTATCGGTTAACATCAGTGCAAACCAACTCTACGGTGAGATTTCTCAAGCATTGTTTCTGAACTGCCCGAAGTTGATGGATTTTGACGCAGCATACAATCGAATCGATGGATCAATTGGACCTAGTATAGGTGAATTGGCATTACTTCGGCTTCTTGATTTGACAGAGAACAAACTATCAGGAGCGCTGCCGAATCAGTTGGGAAATCTACAAAACATGAAATGGTTGCTTCTAGGAGGAAACAATTTAACCGGGGAAATTCCTTACCAGCTTGGTAGATTGACTTCCCTTGTTGTTTTGAACCTGTCTCACAATTCTCTAATGGGAACAATTCCAGAAACTTTGTCGAATACGACAAGTCTTGAAACTATGTTGCTAGATCACAACAACCTTTCTGGGGAAATACCTTTATCTGTTGCCGCTCTTCCCAATCTTGTTCAACTTGATGTTTCTTTCAACAATCTTTCCGGTCATATTCCTCATCTTCAACACCCGATTAATTGTGACTCGTATAAAGGCAATAAATACTTGCACTCTTGCCCTGATCCATACTTCGGCTCGCCTGCTCCTCCCGCAGTTCCTATTGCAGACGATAATTCGGAGAGTCGTCGTAAAAGGAAGAAAGCAAGGACCGTGGTTATTGTGGTGGCGGCTTCTGCTTCTGCGGCTCTATGCACCCTTTTGGTAATAATGCTGGTGATTTGCTTTAGAAGGAGAAAAATGGCTCGGCGAAGCAGCATTAGAAGGCAAGAAGTGGTGACTTTTCAAGCTGTTCCAATTGAATTGAGTTATGATAGCGTTGTCAGAGCTGCCGGAAATTTCAGCATCCGTCATCTAATCGGCGCTGGTGGGTTCGGGTCAACTTACAAGGCAGAGCTATCACCAGGTTTTTTTGTTGCCATTAAGCGGCTTTTGATAGGTAAATTTCAAGGCATACAACAGTTTGAAACGGAAATCAGAACGCTCGGGAGAATTCGACACAAGAATCTTGTGACTCTAATTGGCTATTATGTTGGAAAATCTGAAATGTTGTTGATTTACAATTACCTCTCTGGTGGAAACCTTGAAGCTTTCATACATAATAGGTCAGGTAAAAAAGTGCAGTGGCCGGTTATTTACAAAATAGCGAAAGGTATTGCCGAGGCCCTTGCTTACCTTCATTACTCTTGTGTTCCCCGCATAGTTCACCGAGATATCAAACCCAGCAACATTTTACTCGACGAGAACTTTAATGCCTATCTGTCTGATTTCGGCTTGGCACGCCTGCTTGAGGTATCCGAGACTCACGCCACTACCGACGTGGCCGGCACGTTCGGTTACGTTGCACCTGAATATGCCACCACTTGCAGAGTTTCTGACAAAGCAGACGTTTATAGCTACGGCGTCGTGCTTTTAGAATTGATATCGGGAAGAAGGTCGCTCGATCCGTCGTTCTCTAATTACGGAAACGGATTCAATATAGTACCATGGGCAGAGCTTCTAATGACCGAAGATCGATGTTCTGAGCTTTTTTCATCCGCGTTGTGGGAATCAGGGCCAAAGGAAAAGCTGTTCGAGCTTTTAAAAATCGCGTTAACCTGCACAGAAGAGACTCTTTCTATTCGACCGTCGATGAAGGAAGTTCTTGAGAAACTTAAACTGCTGAAAAGTTGA 3204 0.4288 MGHVFLTLFQFLLLHPFLFTLHANAINPSIPKDALSLLTFKHFVSSDPSNLLSSWTYRSSSTFCRWHGVTCGGRRNRRVISLHVTGLRGGELASSIGELSELRVLSIPGNMFSGEIPVSLMNLRGLEVLEVQGNYFSGNVSFQMSYLESLKLVNLSGNAFSGSIPNGFIFSRNVEIVDLSDNEFSGSIPVNDSVGCDSLKHLKLSDNFLTGEIPPQIGKCRNLRTLLVDGNILEGKIPLEIGLAVELRVLDVSRNSLTGRIPKLLGNCLKLSVLVLTDLFDDRGDSDAGSLFEDKFRGEFNAFVGNIPHAVLSLSSLEILWAPRANLAGRLPAEWTDSSCSLRILNLAENYVTGVVPASLGMCRNLTFLDLSSNNLAGNLPLDQLRVSCMMYFNVSRNNVSGLLPDFRKETCRSSSNAFAALESVFLELDGLNDKYFNVRVLRFQEKAFVGLGFEDSTVVIHDFSWNSFVGSLPLFFVGGNLFTANRKVSYMLSLNNNKFNGTLPNQLVSNCNDLKILSVNISANQLYGEISQALFLNCPKLMDFDAAYNRIDGSIGPSIGELALLRLLDLTENKLSGALPNQLGNLQNMKWLLLGGNNLTGEIPYQLGRLTSLVVLNLSHNSLMGTIPETLSNTTSLETMLLDHNNLSGEIPLSVAALPNLVQLDVSFNNLSGHIPHLQHPINCDSYKGNKYLHSCPDPYFGSPAPPAVPIADDNSESRRKRKKARTVVIVVAASASAALCTLLVIMLVICFRRRKMARRSSIRRQEVVTFQAVPIELSYDSVVRAAGNFSIRHLIGAGGFGSTYKAELSPGFFVAIKRLLIGKFQGIQQFETEIRTLGRIRHKNLVTLIGYYVGKSEMLLIYNYLSGGNLEAFIHNRSGKKVQWPVIYKIAKGIAEALAYLHYSCVPRIVHRDIKPSNILLDENFNAYLSDFGLARLLEVSETHATTDVAGTFGYVAPEYATTCRVSDKADVYSYGVVLLELISGRRSLDPSFSNYGNGFNIVPWAELLMTEDRCSELFSSALWESGPKEKLFELLKIALTCTEETLSIRPSMKEVLEKLKLLKS* 1068
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g2157 1067 Pfam Leucine rich repeat N-terminal domain 32 71 IPR013210 -
Psa3g2157 1067 Gene3D Phosphorylase Kinase; domain 1 753 866 - -
Psa3g2157 1067 Pfam Leucine Rich Repeat 198 220 IPR001611 GO:0005515
Psa3g2157 1067 Pfam Leucine Rich Repeat 247 268 IPR001611 GO:0005515
Psa3g2157 1067 ProSiteProfiles Leucine-rich repeat profile. 365 386 IPR001611 GO:0005515
Psa3g2157 1067 Gene3D Transferase(Phosphotransferase) domain 1 867 1066 - -
Psa3g2157 1067 SUPERFAMILY Protein kinase-like (PK-like) 767 1062 IPR011009 -
Psa3g2157 1067 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 12 1066 - -
Psa3g2157 1067 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE RPK2 12 1066 - -
Psa3g2157 1067 PRINTS Leucine-rich repeat signature 366 379 - -
Psa3g2157 1067 PRINTS Leucine-rich repeat signature 611 624 - -
Psa3g2157 1067 SUPERFAMILY L domain-like 304 684 - -
Psa3g2157 1067 Gene3D Ribonuclease Inhibitor 457 702 IPR032675 -
Psa3g2157 1067 Gene3D Ribonuclease Inhibitor 29 88 IPR032675 -
Psa3g2157 1067 ProSitePatterns Serine/Threonine protein kinases active-site signature. 911 923 IPR008271 GO:0004672|GO:0006468
Psa3g2157 1067 CDD STKc_IRAK 797 1065 - -
Psa3g2157 1067 SUPERFAMILY RNI-like 81 402 - -
Psa3g2157 1067 ProSitePatterns Protein kinases ATP-binding region signature. 797 825 IPR017441 GO:0005524
Psa3g2157 1067 Pfam Protein kinase domain 793 1059 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa3g2157 1067 SMART serkin_6 791 1065 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa3g2157 1067 Gene3D Ribonuclease Inhibitor 295 451 IPR032675 -
Psa3g2157 1067 Gene3D Ribonuclease Inhibitor 89 279 IPR032675 -
Psa3g2157 1067 ProSiteProfiles Protein kinase domain profile. 791 1065 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g2157 Psa-Chr3 190021881 190026009 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g2157 33 1066 Receptor kinase-like Gene Family AT3G02130 42.996 0.0 797
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XV Psa3g2157 Pkinase 9.3e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g2157 - - cam:101512699 1618.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g2157 3 190021881 190026009 Psa3g2157 3 190021881 190026009 ECH