Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g2121 ATGGTAGGAGCTATTAAGGCTGCACTCGGAGACGCAGTATTGACTTTCATGTGGGTTTTTTCTTCTTCCATGTTGGGTATAGTTTCAAAGGCAATAACGCAAGCACTTGGTCTTCAAGATGTTTCGTACAATGGTTTCCCTTACCCTTCTTTGATTATCATCACTACCCTTGTGTTTCTTCTCGTTTTTCTTTTCACCTTAATTGGTAGTGCAATGGGTGGTGCTAGCTTTAACCCTACTGGTACTGCTGCTTTTTATTCCGTTGGTTTGGGTTCTGATACGCTTTTTTCCATGGCTCTTCGTTTCCCTGCCCAGGCTCTTGGTGCTGCGGGTGGTGCAATGGCAATTGCAGAGTTGATTAATCCGAAATATAAACACATGATTGGGGGTCCTTCTTTGAAAGTGGACTTGCATACTGGGGCTGTTGCTGAGTTGGTTTTAACATTTGTGATTACTTTTCTGGTCCTATGCATTTTCATCAAGGGGCCTCGTAATGATTTATTGAAGATTTGGTTGCTGGCCATGTCAACCGTCACTTTGGTCATGGTTGGCTCTGCTTACACTGGTCCGTCCATGAACCCTGCCAATGCCTTTGGTTGGGCATACTTAAACAACCGGCACAACACATGGGACCAATTCTATGTCTACTGGATTTGCCCCTTCACTGGCGCAATATTGGCTGCTTGGCTGTTCCGGGCTATCTTCCCTCCACCAGAAGTAAAACAGAAGAAAGCATGA 738 0.4499 MVGAIKAALGDAVLTFMWVFSSSMLGIVSKAITQALGLQDVSYNGFPYPSLIIITTLVFLLVFLFTLIGSAMGGASFNPTGTAAFYSVGLGSDTLFSMALRFPAQALGAAGGAMAIAELINPKYKHMIGGPSLKVDLHTGAVAELVLTFVITFLVLCIFIKGPRNDLLKIWLLAMSTVTLVMVGSAYTGPSMNPANAFGWAYLNNRHNTWDQFYVYWICPFTGAILAAWLFRAIFPPPEVKQKKA* 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g2121 245 SUPERFAMILY Aquaporin-like 4 238 IPR023271 -
Psa3g2121 245 Pfam Major intrinsic protein 4 231 IPR000425 GO:0015267|GO:0016020|GO:0055085
Psa3g2121 245 Gene3D Glycerol uptake facilitator protein. 3 244 IPR023271 -
Psa3g2121 245 PANTHER AQUAPORIN SIP1-1 3 245 IPR044222 GO:0015250
Psa3g2121 245 PANTHER AQUAPORIN SIP1-1 3 245 - -
Psa3g2121 245 PRINTS Major intrinsic protein family signature 6 25 IPR000425 GO:0015267|GO:0016020|GO:0055085
Psa3g2121 245 PRINTS Major intrinsic protein family signature 58 82 IPR000425 GO:0015267|GO:0016020|GO:0055085
Psa3g2121 245 PRINTS Major intrinsic protein family signature 97 116 IPR000425 GO:0015267|GO:0016020|GO:0055085
Psa3g2121 245 PRINTS Major intrinsic protein family signature 143 161 IPR000425 GO:0015267|GO:0016020|GO:0055085
Psa3g2121 245 PRINTS Major intrinsic protein family signature 174 196 IPR000425 GO:0015267|GO:0016020|GO:0055085
Psa3g2121 245 PRINTS Major intrinsic protein family signature 214 234 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g2121 Psa-Chr3 187012329 187015841 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g2121 4 244 Major Intrinsic Protein MIP AT5G18290 55.785 3.22e-82 244
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g2121 K09875 - gmx:100792787 394.815
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g2121 3 187012329 187015841 Psa3g2121 3 187012329 187015841 ECH