Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g2118 ATGGAGCTCCTTATTAAACTTATCACTTTTCTACTATTTTCTATGCCTGCAATCACCTCCTCCCAATACTTAGGAAACAACCTACTCACCAGTAGAAAGATTTTCCTAAAACAAGAGGAAATTTCCTCTTACGCTGTAGTATTCGATGCTGGTAGCACCGGTAGTCGCATTCATGTTTACCATTTTAACCAGAACCTAGATCTTCTTCATATTGGCAAAGGTGTTGAGTATTATAATAAGATAACACCTGGTTTGAGTTCATACGCTAATAATCCAGAACAGGCTGCAAAATCTCTCATTCCACTTTTAGAGCAAGCAGAAGATGTCGTCCCCGACGATCTTCAACCCAAGACACCCGTTAGACTTGGGGCAACTGCCGGTTTAAGGCTTTTGAATGGAGATGCTTCTGAAAAGATATTGCAATCGGTAAGGGATATGCTGAGCAACAGAAGTACCTTCAACGTTCAACCAGACGCAGTTTCTATAATTGATGGAACCCAAGAAGGTTCTTATCTATGGGTGACAGTTAACTATGCATTGGGAAATTTAGGGAAAAAGTACACAAAAACAGTTGGAGTAATAGATCTTGGAGGTGGATCAGTTCAAATGGCGTATGCAGTATCAAAGAAAACTGCTAAAAATGCTCCAAAAGTTGCAGATGGAGATGATCCATACATCAAGAAGGTTGTACTCAAGGGAATACCATATGATCTCTATGTTCACAGTTACTTACACTTCGGTAGAGAAGCATCTCGAGCAGAGATTTTGAAGCTCACTCCTCGTTCTCCTAACCCTTGCCTTTTAGCTGGATTTAATGGAATCTATACATATTCAGGAGAAGAGTTTAAGGCAACTGCTTACACTTCTGGTGCAAACTTTAATAAATGCAAAAACACAATTCGTAAGGCTCTTAAGTTGAACTATCCTTGTCCATATCAGAATTGCACTTTTGGTGGAATTTGGAATGGTGGAGGAGGAAATGGACAGAAAAACCTTTTTGCTTCTTCATCTTTCTTTTACCTACCTGAAGATACCGGTATGGTTGATGCAAGCACACCTAATTTCATACTTCGGCCGGTCGATATTGAGACTAAAGCTAAAGAAGCTTGCGCGTTAAACTTCGAGGATGCGAAATCTACTTATCCATTTCTTGATAAGAAAAATGTAGCTTCATATGTATGCATGGATCTTATATATCAGTATGTGTTACTCGTTGATGGATTTGGTCTTGATCCATTGCAAAAGATTACATCAGGGAAGGAAATTGAATACCAAGATGCTATTGTGGAAGCTGCATGGCCTCTAGGCAATGCTGTAGAAGCCATATCAGCTTTACCTAAATTTGAGCGATTGATGTATTTTGTTTAA 1368 0.3925 MELLIKLITFLLFSMPAITSSQYLGNNLLTSRKIFLKQEEISSYAVVFDAGSTGSRIHVYHFNQNLDLLHIGKGVEYYNKITPGLSSYANNPEQAAKSLIPLLEQAEDVVPDDLQPKTPVRLGATAGLRLLNGDASEKILQSVRDMLSNRSTFNVQPDAVSIIDGTQEGSYLWVTVNYALGNLGKKYTKTVGVIDLGGGSVQMAYAVSKKTAKNAPKVADGDDPYIKKVVLKGIPYDLYVHSYLHFGREASRAEILKLTPRSPNPCLLAGFNGIYTYSGEEFKATAYTSGANFNKCKNTIRKALKLNYPCPYQNCTFGGIWNGGGGNGQKNLFASSSFFYLPEDTGMVDASTPNFILRPVDIETKAKEACALNFEDAKSTYPFLDKKNVASYVCMDLIYQYVLLVDGFGLDPLQKITSGKEIEYQDAIVEAAWPLGNAVEAISALPKFERLMYFV* 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g2118 455 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 1 455 IPR000407 GO:0016787
Psa3g2118 455 ProSitePatterns GDA1/CD39 family of nucleoside phosphatases signature. 163 178 IPR000407 GO:0016787
Psa3g2118 455 Pfam GDA1/CD39 (nucleoside phosphatase) family 38 446 IPR000407 GO:0016787
Psa3g2118 455 PANTHER NOD FACTOR-BINDING LECTIN-NUCLEOTIDE PHOSPHOHYDROLASE 1 455 - -
Psa3g2118 455 CDD NBD_sugar-kinase_HSP70_actin 46 236 - -
Psa3g2118 455 Gene3D - 44 438 - -
Psa3g2118 455 Gene3D Exopolyphosphatase. Domain 2 164 423 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g2118 Psa-Chr3 186776089 186778960 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g2118 43 444 Calmodulin-binding Proteins AT3G04080 53.846 2.18e-148 429