Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g2114 ATGGATTATAAAACTCCTTTGATGGTTGTTGCTGCTTATGGTAGTATTGATGTTATGAAGCTTATACTCTCGTATCCGGAAGCCGATGTGAATTTTGCTTGTGGGGTGAATAAAAGCACTGCCCTTCACCGTGCTGCTTCTGGTGGGTCTGTTAATGTTGTTGATGCTGTTAGGCTTCGTATAACGGCGGGTGCCCATGTTAGTGGTGTTGATGCCGATGGTAATCTTCCTTTTGATGTCATTGTTGTTACTCCCAAGATGCAAAGAATTAAAGCAGTTCTCGAGGAACTTCTTTTGGATAATGGTTCTGATAACGGATCTGTTGGTGAGTTCTTTGGTCCGGTGTCTGTTGATGCTTCCAATCTTGAGCTGGATAATAATCAGATGACAGGTTTGACACCTCCTGAATCAGGTTCTTGTAAGAAAATGGCCTTGATGAGTTTGGCTGAGAATCAATTGACTGGTGCATTGCCACCAGAATTTGGAAATCTTATCAGTCTTCAAGTCTTGATGAACAAGCTTAATGGTACTATTCCGATTCAAATTTCACAATTGCAAAAAGTTGTCTACATTGAATTTGAGCCAGAATTCTCTGGATGGACCGATTCCGTCTGA 615 0.4146 MDYKTPLMVVAAYGSIDVMKLILSYPEADVNFACGVNKSTALHRAASGGSVNVVDAVRLRITAGAHVSGVDADGNLPFDVIVVTPKMQRIKAVLEELLLDNGSDNGSVGEFFGPVSVDASNLELDNNQMTGLTPPESGSCKKMALMSLAENQLTGALPPEFGNLISLQVLMNKLNGTIPIQISQLQKVVYIEFEPEFSGWTDSV* 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g2114 204 Pfam Ankyrin repeat 3 31 IPR002110 GO:0005515
Psa3g2114 204 SUPERFAMILY L domain-like 94 191 - -
Psa3g2114 204 ProSiteProfiles Ankyrin repeat profile. 37 72 IPR002110 GO:0005515
Psa3g2114 204 SMART ANK_2a 37 72 IPR002110 GO:0005515
Psa3g2114 204 SMART ANK_2a 2 32 IPR002110 GO:0005515
Psa3g2114 204 Gene3D - 1 87 IPR036770 -
Psa3g2114 204 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 56 2 122 - -
Psa3g2114 204 PANTHER UNKEMPT FAMILY MEMBER 2 122 IPR045234 -
Psa3g2114 204 Gene3D Ribonuclease Inhibitor 88 199 IPR032675 -
Psa3g2114 204 SUPERFAMILY Ankyrin repeat 3 85 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g2114 Psa-Chr3 186635281 186636771 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g2114 1 98 C2H2 Transcription Factor Family AT5G12850 53.061 3.44e-28 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g2114 - - cam:101514203 181.415