Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g2085 ATGGATTATAAAACTCCTTTGATGGTTGCTGCTGCTTATGGTAGTATTGATGTTATGAAGCTTATACTCTCGTATCCGGAAGCCGATGTGAATTTTGCTTATGGGGTGAATAAAAGCACTGCCCTTCACCGTGCTGCTTCTGGTGGGTCTGTTAATGTTGTTGATGCTGTTAGGCTTCTTATAACGGCGGGTGCCCATGTTAGTTGTGTTGATGCCGATGGTAATCTTCCTTTTGATGTCATTGTTGTTACTCCCAAGCTGCAAAGAATTAAAGCAGTTCTCGAGGAACTTCTTTTGGATAATGGTTCTGATAACGGATCTGTTGATGCCGTGCCTAGTGCTGTTCCTAGCAGTATGGAACCATTGGCTGTGGAAAAGCGCACAGGAATCAATAATTCTCCTCAATTTCCTGTAACAAAACTGCTAACGAATCTTGATCGTTCAAACACGCATGTGCATCCTAAGCCATCCAATGTTAAGAAACCGAATTCCAGGAATCATACTGAAAAACATAATGTAAACAATGGTTCATCCACTTCATCTGCCTTGCAAAAATCAACTATAGGAGTTGTCTCCAAGCCTGAAAGGTCCAGCATAACCTGCACAAAAGGAAACATTTCAAAACCTGCAATGAAGCCGGACATAATTTGA 651 0.4163 MDYKTPLMVAAAYGSIDVMKLILSYPEADVNFAYGVNKSTALHRAASGGSVNVVDAVRLLITAGAHVSCVDADGNLPFDVIVVTPKLQRIKAVLEELLLDNGSDNGSVDAVPSAVPSSMEPLAVEKRTGINNSPQFPVTKLLTNLDRSNTHVHPKPSNVKKPNSRNHTEKHNVNNGSSTSSALQKSTIGVVSKPERSSITCTKGNISKPAMKPDII* 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g2085 216 MobiDBLite consensus disorder prediction 169 205 - -
Psa3g2085 216 MobiDBLite consensus disorder prediction 144 161 - -
Psa3g2085 216 SMART ANK_2a 37 69 IPR002110 GO:0005515
Psa3g2085 216 SMART ANK_2a 2 32 IPR002110 GO:0005515
Psa3g2085 216 ProSiteProfiles Ankyrin repeat profile. 37 72 IPR002110 GO:0005515
Psa3g2085 216 Pfam Ankyrin repeats (3 copies) 4 69 IPR002110 GO:0005515
Psa3g2085 216 PANTHER UNKEMPT FAMILY MEMBER 2 118 IPR045234 -
Psa3g2085 216 SUPERFAMILY Ankyrin repeat 3 109 IPR036770 -
Psa3g2085 216 Gene3D - 1 196 IPR036770 -
Psa3g2085 216 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 56 2 118 - -
Psa3g2085 216 MobiDBLite consensus disorder prediction 144 216 - -
Psa3g2085 216 ProSiteProfiles Ankyrin repeat region circular profile. 37 71 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g2085 Psa-Chr3 183589743 183590452 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g2085 1 98 C2H2 Transcription Factor Family AT5G12850 54.082 3.12e-29 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g2085 - - cam:101514203 171.785