Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g2081 ATGAAAATGGATGTTTACCAAAATGCATCACTTTCTGGTGACTGCAAACAAGAGAAGCTCCTTAACCCTTCAACTAGCCTTGATGACCTCTTTTCAGCCCAAAACATGGAAGTGAATGTTGAAATGGAGTGGCTTTCAGTGTTTGTTGAAGACTGTTTCTCAAGCCCACAAAGCTGTGTCTTGTTACCCTCTAGTGTTCAAAACACAACAAGTACAACCATTTCATCAAAACCTTCCAACACAACAAACAAACCAAAGCAACAAAATGAGTCACCTTTTGCAGTACCAGGGAAAGCAAGAAGCAAAAGGAAGAGACTTTCAGCTCCAAGAAGAACAAAAGACCCTTTAAGCATTTTATCAAACACCTTAAACCCACAAAACGAGTCCCTATGTTATGACCCTCCTCTTCTAAAACAAACCTATTGGTTAGCCGACAGTGAACTCATTGTACCTAAATCTGATACTGATGCAGAGGTTGCTGAAAAGGAAATTGTGAAAAAGGAAAGGTTTGATTTTGAGGGTTTTGAGGGCTTTGAGAGTTTTGAGAGTGAGAATGATGGTAACAATGGACAAAATCCAGTTCTTCCAACAAGAAGATGCACTCATTGTTTGTCACAGAGGACACCACAATGGAGGGCAGGACCATTAGGACCAAAGACATTATGCAATGCATGTGGTGTGAGGTACAAGTCTGGGAGGTTGTTGCCAGAGTATAGACCTGCAAAGAGTCCAACTTTTGTGAGCTATTTGCATTCAAATTCACATAAGAAAGTCATGGAAATGAGGATGAATGTTGTGTCTTCTATTCCTAGTGACTAG 819 0.4042 MKMDVYQNASLSGDCKQEKLLNPSTSLDDLFSAQNMEVNVEMEWLSVFVEDCFSSPQSCVLLPSSVQNTTSTTISSKPSNTTNKPKQQNESPFAVPGKARSKRKRLSAPRRTKDPLSILSNTLNPQNESLCYDPPLLKQTYWLADSELIVPKSDTDAEVAEKEIVKKERFDFEGFEGFESFESENDGNNGQNPVLPTRRCTHCLSQRTPQWRAGPLGPKTLCNACGVRYKSGRLLPEYRPAKSPTFVSYLHSNSHKKVMEMRMNVVSSIPSD* 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g2081 272 ProSitePatterns GATA-type zinc finger domain. 200 225 IPR000679 GO:0006355|GO:0043565
Psa3g2081 272 PANTHER GATA TYPE ZINC FINGER TRANSCRIPTION FACTOR FAMILY PROTEIN 3 270 - -
Psa3g2081 272 MobiDBLite consensus disorder prediction 70 119 - -
Psa3g2081 272 ProSiteProfiles GATA-type zinc finger domain profile. 194 230 IPR000679 GO:0006355|GO:0043565
Psa3g2081 272 Gene3D - 195 262 IPR013088 GO:0006355|GO:0008270
Psa3g2081 272 Pfam GATA zinc finger 200 234 IPR000679 GO:0006355|GO:0043565
Psa3g2081 272 SMART GATA_3 194 248 IPR000679 GO:0006355|GO:0043565
Psa3g2081 272 CDD ZnF_GATA 199 246 IPR000679 GO:0006355|GO:0043565
Psa3g2081 272 PANTHER GATA TRANSCRIPTION FACTOR 3 270 - -
Psa3g2081 272 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 197 258 - -
Psa3g2081 272 MobiDBLite consensus disorder prediction 70 90 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g2081 Psa-Chr3 183405389 183406973 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g2081 9 262 C2C2-Gata Transcription Factor Family AT4G32890 38.846 1.06e-42 146
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Psa3g2081 GATA 1.8e-14 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g2081 - - gmx:100786479 362.073
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g2081 3 183405389 183406973 Psa3g2081 3 183405389 183406973 ECH