Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g2073 ATGCCAGAGTTGAGAAGTGGAGCTAGAAGGTCAAAGCGACTTGGAGATCTTCAGCCTGGTCCCCTACCTGTTGATCAAGAGGAGAATTGGGCACAGCCTGAACAGAACAGAACTAGGAGGAGAGTTGGAGGTGGAAGAGGAAGAGGTGGTAATGCTACAGGTGTAGGTAAAGGGTCTTCACCAGCTGTACCCACAAGGCGACCTGCAGCTGGTAGAGGCCGCGGAGCAAGATTGATTGATTTGGATCCTGAACCTTGTGAGGTCCTTCCCGTACCTGTTGCATTAAGGGCTCAGGAACCTGTTTACAATCATTTAGAGGTAGTGGCTAATAATAACATTGTAATGGAGGGAGGAAGTGGTGATAAAGTGGCAGTAGCTGAAGAAGAGGCAACCACAACCCCTGTCCCTGAGAGGGTACAAGTTGGTAACTCTCCTGTATATAAGACAGAAAGGAAGTTGGGTAAGGGTGGTTTTGGCCAAGTGTATGTTGGCAGAAGGGTTAATGGTGGATCTGATCGAACAGGTCCTGAGGCCATCGAGGTTGCACTCAAGTTTGAGCATAGAAACAGTAAAGGCTGTAATTATGGGCCTCCTTATGAGTGGCAAGTTTACAGTACTCTGAATGGTTGTTATGGTGTTCCTTGGGTTCATTACAAGGGTCGACAAGGAGATTTCTACATTTTGGTGATGGACATACTTGGGCCCAGCCTTTGGGATGTATGGAATTCTCTTGGTCAATCGATGTCGCCAAGTATGGCTGCTTGTATTGCAGTTGAGGCAATATCAATTCTTGAGAAGCTCCATATGAAAGGGTTTGTGCATGGCGATGTAAAACCAGAAAACTTTTTGCTTGGTCAACCTGGAACGGCTGATGATAAGAAGTTGTATCTTATTGATCTTGGTTTAGCTTCAAAGTGGAAGGATGCATCATCTGGTCAACACGTTGAATATGACCAGAGACCTGATATATTCAGGGGAACAATAAGGTATGCTAGTGTACATGCACATTTAGGTAGGACTGGCAGTCGAAGGGATGATCTTGAGTCACTGGCATACACGTTAATATTTCTCATAAAAGGGAGATTGCCGTGGCAGGGTTATCAGGGTGACAATAAAAGTTTTCTTGTTTGTAAGAAAAAAATGTCCACATCTGCGGAGTTGATGTGCTGCTTTTGTCCTGCTCCATTTAAGCTGTTCCTGGAAGCAGTTACGAACATGAAATTTGATGAGGAGCCAAATTATTCCAAGCTCATATCACTTTTTGACAGCTTGATCGAACCATGCACTCCATTGAGACCTATTAGAATTGATGGAGCTTTAAAGGTTGGTCAAAAGCGAGGAAGGATGCTCCTTATAAATCTGGAGGAAGATGAGCAGCCTAAGAAAAAAGTGCGATTGGGGAGTCCTGCTACTCAGTGGATATCAGTGTATAATGCACGCCGTCCCATGAAGCAAAGATATCATTACAACGTAGCTGACAATAGGCTTGGGCAGCACGTAGACAAGGGTATTGAGGATGGGTTATATATAAGCTGTGTGGCCTCTTCAGCAAATTTGTGGGCTCTAATCATGGATGCAGGAACAGGTTTTTCTTCCCAGGTTTACGAGCTATCACCTGTCTTCCTGCACAAGGATTGGATTATGGAGCAATGGGAAAAAAATTACTATATCAGCTCAATAGCTGGTGCAGTTAATGGCAGTTCCTTGGTTGTCATGTCCAAAGGAACTCCTTATACACAACAGTCCTACAAAGTGAGTGATTCCTTTCCTTTTAAATGGATAAACAAGAAGTGGAAAGAAGGATTCCATGTTACCTCCATGACTACTGCTGGCAGCCGATGGGGTGTTGTAATGTCCAGGAATGCTGGGTATTCTGATCAGGTTGTGGAGCTTGACTTTTTGTATCCAAGTGAAGGAATTCATCGACGATGGGAGAATAATTACCGGATCACTTCTATGGCTGCTACTAATGATCAGGCAGCCTTCATACTGAGCATACCGAAACGCAAATTACTTGATGAAACTCAAGAGACTCTGAGAACATCTGCTTTTCCTAGCACCCATGTAAAGGAAAAATGGGCCAAGAATCTCTATATTGCCTCGATATGTTATGGGCGAACTGTTTGCTAG 2130 0.4423 MPELRSGARRSKRLGDLQPGPLPVDQEENWAQPEQNRTRRRVGGGRGRGGNATGVGKGSSPAVPTRRPAAGRGRGARLIDLDPEPCEVLPVPVALRAQEPVYNHLEVVANNNIVMEGGSGDKVAVAEEEATTTPVPERVQVGNSPVYKTERKLGKGGFGQVYVGRRVNGGSDRTGPEAIEVALKFEHRNSKGCNYGPPYEWQVYSTLNGCYGVPWVHYKGRQGDFYILVMDILGPSLWDVWNSLGQSMSPSMAACIAVEAISILEKLHMKGFVHGDVKPENFLLGQPGTADDKKLYLIDLGLASKWKDASSGQHVEYDQRPDIFRGTIRYASVHAHLGRTGSRRDDLESLAYTLIFLIKGRLPWQGYQGDNKSFLVCKKKMSTSAELMCCFCPAPFKLFLEAVTNMKFDEEPNYSKLISLFDSLIEPCTPLRPIRIDGALKVGQKRGRMLLINLEEDEQPKKKVRLGSPATQWISVYNARRPMKQRYHYNVADNRLGQHVDKGIEDGLYISCVASSANLWALIMDAGTGFSSQVYELSPVFLHKDWIMEQWEKNYYISSIAGAVNGSSLVVMSKGTPYTQQSYKVSDSFPFKWINKKWKEGFHVTSMTTAGSRWGVVMSRNAGYSDQVVELDFLYPSEGIHRRWENNYRITSMAATNDQAAFILSIPKRKLLDETQETLRTSAFPSTHVKEKWAKNLYIASICYGRTVC* 710
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g2073 709 MobiDBLite consensus disorder prediction 1 72 - -
Psa3g2073 709 CDD STKc_CK1 147 421 - -
Psa3g2073 709 ProSitePatterns Protein kinases ATP-binding region signature. 153 184 IPR017441 GO:0005524
Psa3g2073 709 Gene3D Transferase(Phosphotransferase) domain 1 115 460 - -
Psa3g2073 709 ProSitePatterns Serine/Threonine protein kinases active-site signature. 272 284 IPR008271 GO:0004672|GO:0006468
Psa3g2073 709 SMART serkin_6 147 425 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa3g2073 709 ProSiteProfiles Protein kinase domain profile. 147 425 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa3g2073 709 Pfam Protein kinase domain 147 382 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa3g2073 709 PANTHER CASEIN KINASE-RELATED 104 683 - -
Psa3g2073 709 PANTHER BNAA05G37270D PROTEIN 104 683 - -
Psa3g2073 709 SUPERFAMILY Protein kinase-like (PK-like) 147 434 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g2073 Psa-Chr3 183094682 183101083 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g2073 252 421 MAP Kinase Kinase Kinase AT3G27560 22.674 3.91e-08 53.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1-Pl Psa3g2073 Pkinase 7.5e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g2073 - - gmx:100801967 1310.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g2073 3 183094682 183101083 Psa3g2073 3 183094682 183101083 ECH