Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g2068 ATGGAGATTCATTTTCAGCAACCAAGCATGCAGCAGAATCTGAATCTGAATCAGAATCAGAATCAGAAAGCAGGAATTTCAGTCAACAAAGGAGGAAAGTTCAAAGGAAGAAACCGAAACAGCAATAACACAAACAAGTTTGTTGGTGTGAGACAAAGGCCATCAGGTAGATGGGTTGCTGAGATCAAAGACACAACTCAGAAGATAAGAATGTGGCTTGGAACATTTGAGACAGCCGAGGAAGCAGCGCGAGCTTACGACGAAGCCGCGTGCCTTCTTCGAGGTTCCAACACTCGAACCAACTTCATCACTCATGTCTCATTGGATTCTCCTCTTGCTTCTAGGATAAGAAATCTTCTTAACAACAGAAAAGGCGAGAAAAAACAGGAAGATAATGCTGTTGCTTCTGCTCCAAGTAACATCAAGGCTCCTACTAGTAGTAATACTGATACAAATACAGTTACAAGCAATGATGATAACAAGGAGAATTCTCTTTCGAGCGAGGCTACTCAGAATAAAGAACTTTTTGAGGATGGTTATAAACCGGATTTGAGCAATTGCAAGGAGGATTTTGAGTCAGGTTCACAATCCAATTTTTCATGGGGATTTGGACCGGTTTTTGATCATTTTCCTTTTGCTCAATTGTTGGATATCACGAAGAACAACGATGGAATGATCGACGCGTCTAGCTTGGAGCTTTCGGAATTTGAAAGAATGAAAGTTGAAAGACAGATATCAGCTTCACTTTATGCTATTAATGGAGTGCATGAGTACATGGAAGCTGTTCATGACTCCAATGAAACCTTATGGGATCTTCCACCTTTGTGCCCATTGTTCTGTTGA 843 0.4104 MEIHFQQPSMQQNLNLNQNQNQKAGISVNKGGKFKGRNRNSNNTNKFVGVRQRPSGRWVAEIKDTTQKIRMWLGTFETAEEAARAYDEAACLLRGSNTRTNFITHVSLDSPLASRIRNLLNNRKGEKKQEDNAVASAPSNIKAPTSSNTDTNTVTSNDDNKENSLSSEATQNKELFEDGYKPDLSNCKEDFESGSQSNFSWGFGPVFDHFPFAQLLDITKNNDGMIDASSLELSEFERMKVERQISASLYAINGVHEYMEAVHDSNETLWDLPPLCPLFC* 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g2068 280 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 21 267 - -
Psa3g2068 280 ProSiteProfiles AP2/ERF domain profile. 46 103 IPR001471 GO:0003700|GO:0006355
Psa3g2068 280 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERN2 21 267 - -
Psa3g2068 280 MobiDBLite consensus disorder prediction 123 178 - -
Psa3g2068 280 MobiDBLite consensus disorder prediction 133 173 - -
Psa3g2068 280 SUPERFAMILY DNA-binding domain 46 103 IPR016177 GO:0003677
Psa3g2068 280 Pfam AP2 domain 46 95 IPR001471 GO:0003700|GO:0006355
Psa3g2068 280 PRINTS Ethylene responsive element binding protein signature 47 58 IPR001471 GO:0003700|GO:0006355
Psa3g2068 280 PRINTS Ethylene responsive element binding protein signature 69 85 IPR001471 GO:0003700|GO:0006355
Psa3g2068 280 Gene3D AP2/ERF domain 45 104 IPR036955 GO:0003700|GO:0006355
Psa3g2068 280 SMART rav1_2 46 109 IPR001471 GO:0003700|GO:0006355
Psa3g2068 280 CDD AP2 46 102 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g2068 Psa-Chr3 182635355 182636197 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g2068 33 280 AP2-EREBP Transcription Factor Family AT5G19790 45.914 5.93e-59 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Psa3g2068 AP2 6.3e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g2068 K09286 - gmx:100796898 380.948