Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g2065 ATGGAGATTCATTTTCAGCAACCAAGCATGCAGCAGAATCTGAATCTGAATCAGAATCAGAATCAGAAAGCAGGAATTTCAGTCAACAAAGGAGGAAAGTTCAAAGGAAGAAACCGAAACAGCAATAACACAAACAAGTTTGTTGGTGTGAGACAAAGGCCATCAGAAGATAAGAATGTGGCTTGGAACATTTTGAGACAGCCGAGGAAGCAGCGCGAGCTTACGACGAAGCCGCGTGCCTTCTTCGAGGTTCCAACACTCGAACCAACTTCATCACTCATGTCTCATTGGATTCTCTCTCTTGCTTCTAGGATAAGAAATCTTCTTAACAACAGAAAAGGCGAGAAAAAACAGGAAGATAATGCTGTTGCTTCTGCTCCAATTACAAGCAATGATGATAACAAGGAGAATTCTCTTTCGAGCGAGGCTACTCAGAATAAAGAACTTTTTGAGGATGGTTATAAACCGGATTTGAGCAATTGCAAGGAGGATTTTGAGTCAGGTTCACAATCCAATTTTTCATGGGGATTTGGACCGAACAACGATGGAATGATCGACGCGTCTAGCTTGGAGCTTTCGGAATTTGAAAGAATGAAAGTTGAAAGACAGATATCAGCTTCACTTTATGCTATTAATGGAGTGCATGAGTACATGGAAGCTGTTCATGACTCCAATGAAACCTTATGGGATCTTCCACCTTTGTGCCCATTGTTCTGTTGA 720 0.4153 MEIHFQQPSMQQNLNLNQNQNQKAGISVNKGGKFKGRNRNSNNTNKFVGVRQRPSEDKNVAWNILRQPRKQRELTTKPRAFFEVPTLEPTSSLMSHWILSLASRIRNLLNNRKGEKKQEDNAVASAPITSNDDNKENSLSSEATQNKELFEDGYKPDLSNCKEDFESGSQSNFSWGFGPNNDGMIDASSLELSEFERMKVERQISASLYAINGVHEYMEAVHDSNETLWDLPPLCPLFC* 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g2065 239 MobiDBLite consensus disorder prediction 29 55 - -
Psa3g2065 239 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-11-LIKE 18 56 - -
Psa3g2065 239 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-11-LIKE 136 230 - -
Psa3g2065 239 MobiDBLite consensus disorder prediction 34 50 - -
Psa3g2065 239 MobiDBLite consensus disorder prediction 112 153 - -
Psa3g2065 239 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 136 230 - -
Psa3g2065 239 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 18 56 - -
Psa3g2065 239 MobiDBLite consensus disorder prediction 123 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g2065 Psa-Chr3 182616344 182617186 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g2065 33 239 AP2-EREBP Transcription Factor Family AT5G19790 27.236 3.24e-12 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g2065 K09286 - gmx:100796898 231.106
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g2065 3 182616344 182617186 Psa3g2065 3 182616344 182617186 ECH
Psa3g2065 3 182616344 182617186 Psa1g2169 1 162460351 162461391 PCT