Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g2057 ATGGTGGTGAGTATCATATCTCAATCCATTGTTATCCCTTCCAAACCAACCCCTAATCCAAAACTCTTTTCATTATGTGAACAAATCAAGCTTCGTACTCATGCTCCTCTCCTCTACGTTTACAACCCTCATAACAACATATCAACCTTTCTTGAAACACTTAGAAACTCTCTTAGCCATGTTTTGGTTATTTACTATCCACTAGCTGGAAGGTTGAGTTGGATCAAAGATAAAAGGTGGGAACTTAATTGCAACGCTAAAGGAGCAATTCTATTAGAAGCTAAATGTGAAACTAACTTGAAAGATTTGGGTGATTTTGTGCCAACTAATTTGGTGTCACAACTCATACCAAACATTAATTATGATGTTCCAATTGAGGATGTTCCATTATTGGTGGTGCAACTTACGAGGTTCCGTTGTGGCGGTTTTACGTTAGGCGTTGCTTTATGTCGAGCCGCGACGGATGGAATGGCTACCATGCACTTCATGAGCGCATGGGCTAAGTTGGCGCGTGGGGAGTATGTGGACCCTAATGACTTTCCGTGTCATGATCGAATTTTGTTAAATTCACGTAAATCAACAAATTCATCAATATTGCATCGTCATCCGGAGTTTGAAGCGCCTCCAAATTGGATGTCTCATGACTCGGGAGACAATAAAGAAACTAGTGTTACTATTATGAAACTCAAGCGAGAACAAATTTTAAAACTTAAGAAAAATATTGATTCTCACCTGAGTTTTCAATCCACCTCCAAAGATGTTTCTAGAACAAAACCTTTTACAACTTTCGAGGTTATTGCAGGACATCTTTGGAGGTGTGTCACTAAATCACACTACTCGCGTGGAAGTAGTGACCAACCGACAAGGCTGTCCACTTTGGTTAATTGTAGAAATCGTTTAAAACCACCTCTTCCTAGTAGTTACATTGGAAATACAGCATTTCCGACCGTGACACCAACTCGCTCCTTTAACGATCTTATTTGCAAACCTTTGGGTTACGCGGTGGAAGATGTTAGGAACGCACTTGAGAGGGTGACAGGAGAGTATGTAATGTCAGCACTTGATTATATAGATAGTGAGAAGGACATGAAATTATTAAGATATAACTTTCACTACCCTGCAAAGAGTGTGTGTGAGGAGGGAGAATACAAAGGGAGTCCAAATTTATTTGTTGTGAGTTGGATGAATTTTTCATATAAAGAAGCAGATTTTGGGTTGGGAGAACCTTTTTATTTTGGGCCAGGGTACATGGATTCTGAAGGAAAGGCATTTGTTATGAATAATAACAATGGTGATGGTGTTGTGGTGGCAATTTCTTTGGAGGCATCTTATATGGATATATTTAAGAAGTTCTTTTATGAGGATATCAATGAGGTGTTTTGTAGTTCTAAATTGTGA 1398 0.3906 MVVSIISQSIVIPSKPTPNPKLFSLCEQIKLRTHAPLLYVYNPHNNISTFLETLRNSLSHVLVIYYPLAGRLSWIKDKRWELNCNAKGAILLEAKCETNLKDLGDFVPTNLVSQLIPNINYDVPIEDVPLLVVQLTRFRCGGFTLGVALCRAATDGMATMHFMSAWAKLARGEYVDPNDFPCHDRILLNSRKSTNSSILHRHPEFEAPPNWMSHDSGDNKETSVTIMKLKREQILKLKKNIDSHLSFQSTSKDVSRTKPFTTFEVIAGHLWRCVTKSHYSRGSSDQPTRLSTLVNCRNRLKPPLPSSYIGNTAFPTVTPTRSFNDLICKPLGYAVEDVRNALERVTGEYVMSALDYIDSEKDMKLLRYNFHYPAKSVCEEGEYKGSPNLFVVSWMNFSYKEADFGLGEPFYFGPGYMDSEGKAFVMNNNNGDGVVVAISLEASYMDIFKKFFYEDINEVFCSSKL* 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g2057 465 Gene3D - 208 455 IPR023213 -
Psa3g2057 465 Gene3D - 1 207 IPR023213 -
Psa3g2057 465 Pfam Transferase family 2 454 - -
Psa3g2057 465 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 6 461 - -
Psa3g2057 465 PANTHER SHIKIMATE O-HYDROXYCINNAMOYLTRANSFERASE-RELATED 6 461 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g2057 Psa-Chr3 182421608 182423456 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g2057 1 454 Monolignol Biosynthesis Gene Families AT5G48930 35.281 9.84e-87 270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g2057 K13065 - gmx:100775549 573.933