Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g2037 ATGGCTTCTGTGTTTCTTGTGTTGCTAACTTTTTTACTTTCTATAAACTATTCGCAGCAACTTCAATCTTCAAACTCTCAAACCCTTTTGAGAATTCAACAGCTTTTGAACTTTCCTTCTTCTTTAAGAAGTTGGAAAAACTCCACAGATTTTTGCAACACAGATTCAAACTCTTCACTCACTGTTGTATGCTATGAAGATACTATAACTCAACTTCATATAATAGGTGAAGGAAAATCTCAAACTCTGTCGAAAAATTTCTCAATTGATTCATTTGTTACTACACTAGTAAAGCTTCCAAGTTTGAAAGTCCTCACATTGGTTTCTCTTGGTATATGGGGTCCGTTACCGGGTAAAATCGCTCGGCTTTCGTCGTTGGAAATAGTTAACATGAGTTCGAATCATCTCTATGGTTCGATCCCTATCGAACTTTCATCGCTTTCCAATCTTCAAACACTCATTCTTGACAACAACATGTTTTCTGGTGTGCTTCCTATTTGGATTGACTTGCTTTCGGGCTTAACTGTGTTGAGTTTGAAGAACAATTTGTTCAATGGAACGTTGCCGAATTCGGTTAGTAACTTGGATAATTTGAGAGTTCTTTCTCTTTCTCATAATAAATTTTATGGTGTAGTACCTGATTTGAGTCACTTGAGAAATCTTCAAGTACTTGAATTGGATGATAATGCTTTTGGACCTCAATTTCCAAAGCTTGGTCACAAATTGGTTACTATAGTGCTACGAAATAACATGTTCAGGTCTGGTATTCCTGCTGATGTGAGCTCGTATTATCAGCTCAAGCGATTTGATATCTCATCGAATACATTTATCGGGCCATTTCAAACAGCATTGTTGTCACTCCCTTCTATCGCTTACATCAACATCTCTCAGAACAAATTAACCGGAATGCTTTTCGAGAATGTTTCCTGCAATTCCGAGCTTGAAGTTGTTGATTTATCGTCGAATCTCTTGACGGGGAGCTTACCTAAATGTCTAGTTTCAAATTCTAGTGATAGGACTGTTTCGTATGCTAGAAATTGTCTCGAGACAACGAATCAAAATCAGCAGCCACCTCCTTTTTGCCACACCGAGGCCTTAGCTGTGGGAGTATTACCTGAAAGAAAGAAACACAAGCAAGTATCAAAGGTAGTTCTTACCCTTGGTATAGTAGGTGGAACTCTTGGAGGAGTAGCAGTTTTTTTGCTGATTTTGTTTATTGTTAGAAGAGGAAATTCTAGAAGCAAAACAAAGAAGAATCCTCCAACAAGACTAATATCGGAGAATGCAGCTTCCGGATACACCTCTAAGTTGCTTTCTGATGCAAGATATATATCTCAAACAAAGAAATTCGGAGCACTTGGCCTGCCAAATTATAAGAGTTTTTCATTGGAAGAGATCGAGGCAGCTACAAACAACTTCGACACGGCTTCTTTCATAGGTGAAGATTCTTATGGAGAGATGTACAAAGGTCAGCTGAAGAATGGATCCTTTGTTGTTATTAGATGTATCAAAATGAAAAAAAGATACAGCACTCAGAACTTCATGCAGCACATGGAACTTATCTCGAAACTTAGGCACTGTCATTTGGTTAGCGCTCTCGGACACTGCTTCGAATGTTCTTTAGAAGATTCAAGTGTTAGCAGAATATTTCTCGTATTTGAATACATACCAAATGGCACACTCAGGAGCTGGACATCTGACGGGCACACTGGAAAATCTCTGAATTGGACGCAACGCATAGGAGCAGCAATTGGAGTAGCAAAGGGAATTCAATTTTTGCATACAGGAATTGTCCCTGGTGTATATTCAAACAAACTCAAAATTGAGGATGTTTTATTGGATCACAATCTTGTTGCGAAAATCAGAAGTTATAACTTGCCTTTGTTATCTAACATTGGAAAGGTTCGACGTGGAAACTCTTCCAATGGATTCAAACATTCTAGTATCAATAAAAGTGGAAAGCATGAAGATAAATGTGACATATATGACTTTGGAGTAATATTACTGGAAATCATTCTAGGAAGGACAATAAAGACAACAAATGATGCAGAAGCTTTTAAGGAACTGTTGCAAGCAAGCTTAGGAGCAGACGAGGACGCTCGAAGAAGCATTGTTGATCAAGCAATTCGCAAGGCGTGCTTGGAACAATCATTGAAGACAATGATGGAGATATGTGTGAGGTGTCTTATTAAAGAACCTGCAGAAAGACCCTCCATAGAAGATGTTTTGTGGAATTTACAGTTTGCTGCTCAAGTACAGGATGCTTGGAGAGGTGATTCTCAAAGTAGTGAGGGGTCGCCAGGTTCTCCTCAAAGAACGGCCTTCCGTTAG 2331 0.3878 MASVFLVLLTFLLSINYSQQLQSSNSQTLLRIQQLLNFPSSLRSWKNSTDFCNTDSNSSLTVVCYEDTITQLHIIGEGKSQTLSKNFSIDSFVTTLVKLPSLKVLTLVSLGIWGPLPGKIARLSSLEIVNMSSNHLYGSIPIELSSLSNLQTLILDNNMFSGVLPIWIDLLSGLTVLSLKNNLFNGTLPNSVSNLDNLRVLSLSHNKFYGVVPDLSHLRNLQVLELDDNAFGPQFPKLGHKLVTIVLRNNMFRSGIPADVSSYYQLKRFDISSNTFIGPFQTALLSLPSIAYINISQNKLTGMLFENVSCNSELEVVDLSSNLLTGSLPKCLVSNSSDRTVSYARNCLETTNQNQQPPPFCHTEALAVGVLPERKKHKQVSKVVLTLGIVGGTLGGVAVFLLILFIVRRGNSRSKTKKNPPTRLISENAASGYTSKLLSDARYISQTKKFGALGLPNYKSFSLEEIEAATNNFDTASFIGEDSYGEMYKGQLKNGSFVVIRCIKMKKRYSTQNFMQHMELISKLRHCHLVSALGHCFECSLEDSSVSRIFLVFEYIPNGTLRSWTSDGHTGKSLNWTQRIGAAIGVAKGIQFLHTGIVPGVYSNKLKIEDVLLDHNLVAKIRSYNLPLLSNIGKVRRGNSSNGFKHSSINKSGKHEDKCDIYDFGVILLEIILGRTIKTTNDAEAFKELLQASLGADEDARRSIVDQAIRKACLEQSLKTMMEICVRCLIKEPAERPSIEDVLWNLQFAAQVQDAWRGDSQSSEGSPGSPQRTAFR* 777
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g2037 776 PANTHER INACTIVE LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE-RELATED 3 766 - -
Psa3g2037 776 SUPERFAMILY Protein kinase-like (PK-like) 456 748 IPR011009 -
Psa3g2037 776 MobiDBLite consensus disorder prediction 757 776 - -
Psa3g2037 776 ProSiteProfiles Protein kinase domain profile. 473 748 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa3g2037 776 Gene3D Ribonuclease Inhibitor 240 358 IPR032675 -
Psa3g2037 776 Gene3D Phosphorylase Kinase; domain 1 436 555 - -
Psa3g2037 776 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 3 766 - -
Psa3g2037 776 Pfam Protein tyrosine and serine/threonine kinase 478 743 IPR001245 GO:0004672|GO:0006468
Psa3g2037 776 SUPERFAMILY L domain-like 32 349 - -
Psa3g2037 776 ProSiteProfiles Leucine-rich repeat profile. 197 219 IPR001611 GO:0005515
Psa3g2037 776 Gene3D Ribonuclease Inhibitor 22 239 IPR032675 -
Psa3g2037 776 Pfam Leucine rich repeat 148 208 IPR001611 GO:0005515
Psa3g2037 776 Gene3D Transferase(Phosphotransferase) domain 1 556 763 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g2037 Psa-Chr3 181346390 181349307 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g2037 38 767 Miscellaneous Gene Families AT3G03770 62.585 0.0 894
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Psa3g2037 PK_Tyr_Ser-Thr 3.6e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g2037 - - gmx:100786077 1221.84