Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g2014 ATGTTTGCCATGTGCAACACTAATCATGATCCAAACAAGGGAAAGGAAAAACTGAATGAAGAATCAGTAGCCAAGCAGACGAATGAGAACAAGCGAAAGGTGATTGTGTTGGAAGAAAAACTTGACGCTGAATCCAAGAGTTCAAAGTGTCTCAAGAATGATAATGGTGAAGAAAAATCAACAAATTCATCCAAAGAAATTTCTCCATTTGTTCTTTTTGGATTCATTATTGATCCAACTAAAGGAAATCGAAAAGCTTACTCGTGCAAATTTTGTAGCCAGAAGTTTGTTTCTCCACAAGCACTAGGTGGACACCAAAATTGCCACAAAGTGGAGAGAGGACTCCAGAAAAAGAACGAAACTATGAACAAAGTTTGGGAATTTTTCTCTAATGGTAATGTGGGGTATGGATATCAATATTATGAATTTGACATAATGAATCACAATTTTGAAGGGTCGTCAAGTTTTGATGCATGGGATTTGCACCATTTTCAGCATATAGATCAAAACAATGTCAATCAACAACTTACTATGCCTGAAAATGAATTTGGTTTGGTTTCAAAGGGAGGTGCAGATAGCGATGCTGACCATGAACACAAATATGCTCAGGAGGAGGAGGAGGAGGCAGCATCCAAAAATATTAATTTGAACCTTAAACTTTGA 663 0.3695 MFAMCNTNHDPNKGKEKLNEESVAKQTNENKRKVIVLEEKLDAESKSSKCLKNDNGEEKSTNSSKEISPFVLFGFIIDPTKGNRKAYSCKFCSQKFVSPQALGGHQNCHKVERGLQKKNETMNKVWEFFSNGNVGYGYQYYEFDIMNHNFEGSSSFDAWDLHHFQHIDQNNVNQQLTMPENEFGLVSKGGADSDADHEHKYAQEEEEEAASKNINLNLKL* 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g2014 220 MobiDBLite consensus disorder prediction 191 212 - -
Psa3g2014 220 Gene3D Classic Zinc Finger 60 131 - -
Psa3g2014 220 ProSitePatterns Zinc finger C2H2 type domain signature. 89 109 IPR013087 -
Psa3g2014 220 PANTHER ZINC FINGER PROTEIN JAGGED 7 153 IPR045320 GO:0003700
Psa3g2014 220 MobiDBLite consensus disorder prediction 10 29 - -
Psa3g2014 220 ProSiteProfiles Zinc finger C2H2 type domain profile. 87 114 IPR013087 -
Psa3g2014 220 MobiDBLite consensus disorder prediction 189 214 - -
Psa3g2014 220 SUPERFAMILY beta-beta-alpha zinc fingers 83 114 IPR036236 -
Psa3g2014 220 MobiDBLite consensus disorder prediction 1 29 - -
Psa3g2014 220 PANTHER EXPRESSED PROTEIN 7 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g2014 Psa-Chr3 179329128 179330087 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g2014 85 143 C2H2 Transcription Factor Family AT5G57520 45.763 2.24e-09 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g2014 - - mtr:MTR_7g022250 177.563