Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g2009 ATGCAGCTAAGAATCGTCCATGTATGTGAGGCAACTTTAACCAAGCGATTGATAGAATTTGAGAACACGGACTCTTCTAGCTTGACAGTTGAAGAGTTGAATACAATGGCAAAAGATCATGAAAAAAATCCGGCTGTGTTGCCAAACAGTAAAATCAAAGGATCTACTTCATACGATCTACTGTGCGAACACAAAGATAGCGACGTGCCCTATTTTGCACTAGGACTATGTAAAACATGTTACAAGGATTTTGATATGCTATCGGGAGGATTCAGTGGTGGTTTGGACCCTCCTGCATTCCAGCGTGCTGAGAGGGAGAGAGTAAAGAAAACACTTTCTAAGGAAAATGCAGATGTGCTGAAGGCATCAAATGACACATGCCAGGGACAGAAAGAAGACATGCCTGCCTCGGCGCTAGAACAGGATGACACTAGTGCAAAAACTCAAGATGAATCAGGAAATTTCTCTGATATCGATGATCATGAGGTTGATGGGTACATTTTCAATGAGGAGGAGAAATACTACAAGAAGATAATATGGGAAAGTGCAAACCGCGAGTATCTTGAGGAGCAAGCAGCCAAGGAAGCCGCTGTAGCAGCTGAGAAGAAAATTTATGAAGAAAATATGAAAAATTGTCCGGTAGAATCAAGAGAGCTATATGAATCTACTACTGCAGCTGTGGCAAAATCCAAAAAGAAACGAGCTGAAGAGGCAAAGAATTCAGGGCCTGCTCAGTCTGCTGCAGAGGCCGCTTGCCAAATGGTGAAAACAAAGAGGCTTAGTAAAAAAGTCAACTTTGATTGCCTTGCAAAATTATTTGAAGACGAACCAGTAATTCTCTTTTGA 846 0.4173 MQLRIVHVCEATLTKRLIEFENTDSSSLTVEELNTMAKDHEKNPAVLPNSKIKGSTSYDLLCEHKDSDVPYFALGLCKTCYKDFDMLSGGFSGGLDPPAFQRAERERVKKTLSKENADVLKASNDTCQGQKEDMPASALEQDDTSAKTQDESGNFSDIDDHEVDGYIFNEEEKYYKKIIWESANREYLEEQAAKEAAVAAEKKIYEENMKNCPVESRELYESTTAAVAKSKKKRAEEAKNSGPAQSAAEAACQMVKTKRLSKKVNFDCLAKLFEDEPVILF* 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g2009 281 Gene3D Single helix bin 134 197 - -
Psa3g2009 281 PANTHER TRANSCRIPTION INITIATION FACTOR IIB-RELATED 4 273 IPR000812 GO:0006352|GO:0070897
Psa3g2009 281 PANTHER TRANSCRIPTION FACTOR IIIB 90 KDA SUBUNIT 4 273 IPR029529 GO:0000126|GO:0000995|GO:0006383
Psa3g2009 281 MobiDBLite consensus disorder prediction 121 152 - -
Psa3g2009 281 Pfam Brf1-like TBP-binding domain 156 274 IPR011665 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g2009 Psa-Chr3 179029231 179032196 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g2009 4 258 Inorganic Solute Cotransporters AT2G01280 40.075 1.90e-40 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g2009 K15196 - gmx:100817609 292.352