Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g2004 ATGAAGCTGATATCAATCATCCTCTTTTTCTTTGTACTTCCCTTAGCATTTGCTGATCTGCAATTAGGATTCTACGCCTCTTCTTGCCGAAAAGCCGAGTCGATTGTGCAGCAAGTTGTGCAGAAGCGATTTAGAGGACCAAAATACAGCGTTCCTACCGGAAGACGCGACGGATTAGTCTCCAACAGCAAAGATGTTAATTTACCAGGACCAACCATTCCTGTAACAATCCTAACACAATTTTTTGCTGCAAAAGGAATCACAGTTGAAGAAATGGTGACACTTTTGGGAGCACATACCGTCGGTGTAGCACACTGTGGTTTTTTCTCTAGTAGGTTATCTAGTACTAGAGGGAAACCTGATCCTACAATGGATCCTGCATTGGATGCTAAGCTTGTTGAGCTGTGCAAGGCAAGCAATGCTGCTGCATTTTTGGATCAGAATACTTCGTTTGTCGTCGATAACGAATTTTACAAGCAGATTCTTCTTAAGAGAGGTGTAATGCAGATTGATCAGCAACTTGCTTTGGACAAATCCACAAGTACTTTTGTGTCAAATTTTGCTTCAAATGGTGACAAGTTTGGTAAGAGTTTTGCAAGTGCTATAATAAAGATGGGAAAAGTTGAGGTTTTGGTTGGAAATCAAGGCGAAATTCGCAAGAATTGTAGGGTTTTCAATAAACGCAGTTAG 690 0.4087 MKLISIILFFFVLPLAFADLQLGFYASSCRKAESIVQQVVQKRFRGPKYSVPTGRRDGLVSNSKDVNLPGPTIPVTILTQFFAAKGITVEEMVTLLGAHTVGVAHCGFFSSRLSSTRGKPDPTMDPALDAKLVELCKASNAAAFLDQNTSFVVDNEFYKQILLKRGVMQIDQQLALDKSTSTFVSNFASNGDKFGKSFASAIIKMGKVEVLVGNQGEIRKNCRVFNKRS* 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g2004 229 SUPERFAMILY Heme-dependent peroxidases 20 226 IPR010255 GO:0004601|GO:0006979|GO:0020037
Psa3g2004 229 Gene3D - 45 226 - -
Psa3g2004 229 Coils Coil 229 229 - -
Psa3g2004 229 Gene3D Peroxidase, domain 2 69 205 - -
Psa3g2004 229 PRINTS Plant peroxidase signature 45 60 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa3g2004 229 PRINTS Plant peroxidase signature 90 102 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa3g2004 229 PRINTS Plant peroxidase signature 144 159 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa3g2004 229 PRINTS Plant peroxidase signature 160 177 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa3g2004 229 PRINTS Plant peroxidase signature 200 213 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa3g2004 229 Pfam Peroxidase 44 190 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa3g2004 229 PRINTS Haem peroxidase superfamily signature 45 57 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa3g2004 229 PRINTS Haem peroxidase superfamily signature 91 106 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa3g2004 229 PRINTS Haem peroxidase superfamily signature 146 161 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa3g2004 229 ProSitePatterns Peroxidases proximal heme-ligand signature. 91 101 IPR019793 -
Psa3g2004 229 PANTHER PEROXIDASE 25-RELATED 46 225 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa3g2004 229 ProSiteProfiles Plant heme peroxidase family profile. 28 226 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa3g2004 229 PANTHER PEROXIDASE 46 225 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g2004 Psa-Chr3 178857769 178858950 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g2004 8 48 Peroxidase AT4G26010 56.098 3.07e-07 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g2004 K00430 - gmx:100777946 256.914