Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g1942 ATGGGATCTCATGGTGGAGCAATCCAAGCGTCAAAGGCAGGACCTTTGGCTAGAGAAGGATCTTTGTACAATCTCACACTTGATGAGGTACAAAATCAGCTTGGAAATTTAGGGAAACCCTTAGGAAGCATGAATCTGGATGAGTTACTCAAGAGTTTGTGGACATCTGAAGCTGCTCAAGCTTCTGGATTGGATTCTGGTTCAACTGATGCTTACCTGCAACAGGGTCAACTAGCTTCTGGGTCGTCTATGAATCCGCTAACACTTTCCGGTGATCTTAGCAAGAAAACTATTGATGAGGTTTGGAGAGATATGCAACAGAAGAAGAGTTCTAGTGAAGATAGGAGAACGGCTACACTAGGTGAGATGACTTTGGAAGATTTCTTAATGAAAGCTGGTGTGGCTACTGAATCTTTTCCTACAGAGGATAATGCTATGTCAGGAAGGGTTGATTCTCAACAACAACAGCACAATACATCTCAACATGGTCATTGGATGCAGTTCCAAATCCCTCCGGTGCAACTACCACAACAACAGCATCAGCATCAGCATCAGCATCAAAATCAAAATCATCAGAATAATATGATGCCTGGTTTTGCAAGTTATATGGCTAGTCATGTGGTTCAACAGCCGGTTTTGGATGCAGGATACAATGAAGCAATGGTGAGTATATCACCGTCTTCTTTAATGGCTACTTCATCGGATACACAAACTCAAGGTAGGAAAAGGGTTGCCTCTGGTGTTGTGGTTGAGAAAACTGTGGAGAGGAGGCAGAAGAGGATGATTAAAAATAGGGAATCTGCAGCTCGGTCGCGGGCTAGAAAACAGGCTTACACACAAGAACTGGAGATCAAAGTTTCACATTTAGAAGAAGAAAATGAAAGGCTTAAAAGACTACATGAGATGGAGAGAGTATTGCCAAGTATGCCACCACCAGACCCTAAGCATCAGCTTCGAAGAACTAGCTCAGCTCCCTTCTGA 981 0.4332 MGSHGGAIQASKAGPLAREGSLYNLTLDEVQNQLGNLGKPLGSMNLDELLKSLWTSEAAQASGLDSGSTDAYLQQGQLASGSSMNPLTLSGDLSKKTIDEVWRDMQQKKSSSEDRRTATLGEMTLEDFLMKAGVATESFPTEDNAMSGRVDSQQQQHNTSQHGHWMQFQIPPVQLPQQQHQHQHQHQNQNHQNNMMPGFASYMASHVVQQPVLDAGYNEAMVSISPSSLMATSSDTQTQGRKRVASGVVVEKTVERRQKRMIKNRESAARSRARKQAYTQELEIKVSHLEEENERLKRLHEMERVLPSMPPPDPKHQLRRTSSAPF* 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g1942 326 Pfam bZIP transcription factor 256 298 IPR004827 GO:0003700|GO:0006355
Psa3g1942 326 SUPERFAMILY Leucine zipper domain 256 301 IPR046347 GO:0003700|GO:0006355
Psa3g1942 326 SMART brlzneu 252 320 IPR004827 GO:0003700|GO:0006355
Psa3g1942 326 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 254 298 IPR004827 GO:0003700|GO:0006355
Psa3g1942 326 MobiDBLite consensus disorder prediction 302 326 - -
Psa3g1942 326 CDD bZIP_plant_BZIP46 256 302 - -
Psa3g1942 326 Coils Coil 279 299 - -
Psa3g1942 326 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 2 324 IPR043452 GO:0003700|GO:0045893
Psa3g1942 326 Gene3D - 254 306 - -
Psa3g1942 326 PANTHER BZIP TRANSCRIPTION FACTOR 2 324 - -
Psa3g1942 326 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 259 274 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g1942 Psa-Chr3 174424444 174427826 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g1942 1 326 bZIP Transcription Factor Family AT3G56850 54.030 2.26e-99 293
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Psa3g1942 bZIP_1 2.3e-13 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g1942 K14432 - gmx:100783666 399.053