Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g1937 ATGCACAGATTAAGTTATCTTTTGTTATCCATCCTCTTATTCATCATTCCTGTTGCTGGTGTTGCTATTAATGCAGATGAAGATGCAGATTACATGTCTCAACTTTTGAAAGCACTCACCCCAACTCCAACAGGTTGGTCTCAGAAAACTCACTTCTGCAAATGGAGCGGCATTGTTTGCATGTCTGGTCGAGTTCGTGCCATCGCACTTCCGTCAAGCAACCTCACTGGAACACTCCCTCCCGATCTCAACACTCTTACTAATCTCACCCATATTGATCTCCACAACAACTCACTCACCGGTCCTTTGCCTTATTTGTCTGGCCTCTACCTTCTCCAAACGGTTTCATTTGGTCACAATAACTTCACCTCCATCCTAGACGGTTGCTTTCGCGTGATACCGGATCTGAGAACCTTAAACCTTAGCAATAACTTGAATCTCATACCATGGCTATTTCCTACGGATTTAATTGATTCGTCACTCATGCAAACGCTCGATCTTGAAGCTACAAATATCCTAGCTACCTTGCCATCGGAAATGTTCGATTGGTTTCCGAGTCTGCATACTGTTTTTCTTTCTCACAACAACATCACTGGAAAGCTTCCAGTGTCTCTTGGGAAATCTGCAGTAAGGTATTTACGATTCAACGACCAAGGGATGTGGAATCGGTTCACAGGTTCCATTGATGTGATATCATCAATGAAGTTCTTGTCTCAAGCATGGCTTCACAACAACGGCTTCACCGGTCCAATTCCTAACATGTCTAATTCCAATTATTTGTTTGATTTGCAACTTCACTCAAATATCTTGACTGGTTTGGTTACACCTTCTTTGTTCCCTCTCTCTACCTTGAAAAACATCTCAATACATGATAATTGTCTTCAAGGACCGGTGCCTGTGTTTCCTAAGGATATTAAAGCAACTTGGGAAGATAACAACTTTTGCGTTGGACCTTGTGATCCACAGGTCACCATTTTGCTTCAGATTTTTGAAGCTTTTGGATTTCCTGTTCTTTTGTCAAGTAAAGGAAGCGATGCTTGTTCTTTAGAGCCATTGTTTGCATGCCAAAGAGGAAAAATTATGAGCATTGATTTGAATAATCAGGGTTTAACAGGAACTATCTCTATGGCATTTTCCAATTTAACAAGTTTAGTGATCTTGAATCTTGGTGGCAATAATTTGACAGGTTCAATACCACGCAGTCTTGCAACTTTGCCTCAACTCCAACTTCTTGATGTTTCTGATAATAATCTATCTGGAAGAGTTCCCAAATTTTCGTCCAAGGTGATGTTAATTACCAGAGGCAATACTTTGCTTGGACTAAATGGTTCTCGGCGAGGGGGAGAAGAAGATGCAACTGATTCTCTTCATGGAGGCCCATCTAAAACAGCAGGGTTTAGATATCTTTTGATTATAGGGACATCAATGTTTAGTGTTGGAATTGTAATATTTATTGTGATTATTTGCAAACGTAAGAGGTATTCTATTACACTAAACAGGTTGATCTTCAGAAGTACAAAGAAATCTATTGACTACAATGTGGAGGATTTTATACAAACTTATAACTTGTCGGTACCGATTAAGCAATATAGATACGCAGAGGTGAAAAGAATGACAAATTCTTTCAGAGATCAATTAGGTCGAGGAGGATATGGTATTGTGTACAAAGCAAGTTTACCCGATGGTCGTCAAGTGGCAGTGAAAATGATAAACGACTCGAAGGGGAATGGAGAAGAATTCATAAACGAAGTCGCTAGCATTAGTAGAACCTCACATGTGAATATCGTCTCACTAGTGGGTTTTTGTTATGAGAATAAAAGAGCACTTATATATGAATTCATGCCCAATGGTTCATTAGATAAGTATATCTTTAAAAATGGATTTTCTGATGCTATTTGTAGTTTGGATTGGAATACATTGTACCAAATTGCAATAGGAATTGCTCGAGGGCTAGATTACTTGCATCAAGGATGTATTTCAAGAATTTTGCATCTTGATATCAAACCTCAAAATATTCTCTTGGATGAAGATTTTTGTCCGAAAATTTCTGATTTTGGACTAGCTCAAATTTGTCGAAGGAATGATAGTATTGTGTCCATACTTGGTACAAGAGGAACTATAGGATATATAGCTCCTGAAGTATTTAGTCGAACATTTGGTGCAGTTTCTTACAAGTCTGATGTATATAGTTATGAGGAGGAAAGGGATTTGATACGAAAGATTACTATGGTTAGTATATGGTGCATTCAAACAAATCCATTAGATAGACCATCGATGAGTAAAGTAATAGAAATGCTACAAGGACCACTTGAGTCAGTATCATATCCTCCAAAACCTTGCTTATATTCTCCTGAAGTGCCATCATTACAAACTTCATATGAGTCTTCCAACAATTTGTTAGAGGATATGAAAATATGA 2418 0.3834 MHRLSYLLLSILLFIIPVAGVAINADEDADYMSQLLKALTPTPTGWSQKTHFCKWSGIVCMSGRVRAIALPSSNLTGTLPPDLNTLTNLTHIDLHNNSLTGPLPYLSGLYLLQTVSFGHNNFTSILDGCFRVIPDLRTLNLSNNLNLIPWLFPTDLIDSSLMQTLDLEATNILATLPSEMFDWFPSLHTVFLSHNNITGKLPVSLGKSAVRYLRFNDQGMWNRFTGSIDVISSMKFLSQAWLHNNGFTGPIPNMSNSNYLFDLQLHSNILTGLVTPSLFPLSTLKNISIHDNCLQGPVPVFPKDIKATWEDNNFCVGPCDPQVTILLQIFEAFGFPVLLSSKGSDACSLEPLFACQRGKIMSIDLNNQGLTGTISMAFSNLTSLVILNLGGNNLTGSIPRSLATLPQLQLLDVSDNNLSGRVPKFSSKVMLITRGNTLLGLNGSRRGGEEDATDSLHGGPSKTAGFRYLLIIGTSMFSVGIVIFIVIICKRKRYSITLNRLIFRSTKKSIDYNVEDFIQTYNLSVPIKQYRYAEVKRMTNSFRDQLGRGGYGIVYKASLPDGRQVAVKMINDSKGNGEEFINEVASISRTSHVNIVSLVGFCYENKRALIYEFMPNGSLDKYIFKNGFSDAICSLDWNTLYQIAIGIARGLDYLHQGCISRILHLDIKPQNILLDEDFCPKISDFGLAQICRRNDSIVSILGTRGTIGYIAPEVFSRTFGAVSYKSDVYSYEEERDLIRKITMVSIWCIQTNPLDRPSMSKVIEMLQGPLESVSYPPKPCLYSPEVPSLQTSYESSNNLLEDMKI* 806
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g1937 805 Pfam Protein kinase domain 544 731 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa3g1937 805 SMART LRR_typ_2 184 208 IPR003591 -
Psa3g1937 805 SMART LRR_typ_2 405 427 IPR003591 -
Psa3g1937 805 SMART LRR_typ_2 86 108 IPR003591 -
Psa3g1937 805 SMART LRR_typ_2 109 132 IPR003591 -
Psa3g1937 805 SMART LRR_typ_2 381 404 IPR003591 -
Psa3g1937 805 ProSiteProfiles Protein kinase domain profile. 540 805 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa3g1937 805 Gene3D Transferase(Phosphotransferase) domain 1 614 776 - -
Psa3g1937 805 PANTHER TYROSINE KINASE FAMILY PROTEIN 732 803 - -
Psa3g1937 805 PANTHER TYROSINE KINASE FAMILY PROTEIN 23 731 - -
Psa3g1937 805 Gene3D Ribonuclease Inhibitor 323 442 IPR032675 -
Psa3g1937 805 ProSitePatterns Protein kinases ATP-binding region signature. 546 568 IPR017441 GO:0005524
Psa3g1937 805 Pfam Leucine rich repeat 360 418 IPR001611 GO:0005515
Psa3g1937 805 Gene3D Phosphorylase Kinase; domain 1 504 613 - -
Psa3g1937 805 SMART serkin_6 540 770 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa3g1937 805 SUPERFAMILY L domain-like 59 427 - -
Psa3g1937 805 ProSitePatterns Serine/Threonine protein kinases active-site signature. 662 674 IPR008271 GO:0004672|GO:0006468
Psa3g1937 805 PANTHER RUST RESISTANCE KINASE LR10-RELATED 732 803 IPR045874 GO:0004672
Psa3g1937 805 PANTHER RUST RESISTANCE KINASE LR10-RELATED 23 731 IPR045874 GO:0004672
Psa3g1937 805 Gene3D Ribonuclease Inhibitor 27 318 IPR032675 -
Psa3g1937 805 SUPERFAMILY Protein kinase-like (PK-like) 528 796 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g1937 Psa-Chr3 174146913 174149918 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g1937 527 785 Receptor kinase-like Gene Family AT5G38280 54.019 1.40e-105 337
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Psa3g1937 Pkinase 1.3e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g1937 - - cam:101489592 1075.85